Files in ChristianHuber/smartsnp
Fast Multivariate Analyses of Big Genomic Data
.DS_Store
.Rbuildignore
.github/.gitignore
.github/workflows/pkgdown.yaml
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/RcppExports.R
R/read_packedancestrymap.R
R/smart_mva.R
R/smart_pca.R
R/smart_permanova.R
R/smart_permdisp.R
R/smartsnp-package.R
README.Rmd
README.md
_pkgdown.yml
cran-comments.md
data-raw/dataSNP.R
docs/404.html
docs/LICENSE-text.html
docs/LICENSE.html
docs/_config.yml
docs/articles/Converting_VCF_and_PLINK_formats.html
docs/articles/Converting_VCF_and_PLINK_formats_files/header-attrs-2.8/header-attrs.js
docs/articles/aDNA_smartpca_analysis.html
docs/articles/aDNA_smartpca_analysis_files/header-attrs-2.8/header-attrs.js
docs/articles/figure/data_transformation_example_plot-1.png
docs/articles/figure/lazaridis_plot-1.png
docs/articles/figure/pca_plot_mallard-1.png
docs/articles/index.html
docs/articles/mallard_smartpca_analysis.html
docs/articles/mallard_smartpca_analysis_files/header-attrs-2.8/header-attrs.js
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Rplot001.png
docs/reference/Rplot002.png
docs/reference/figures/README-example-1.png
docs/reference/figures/README-pressure-1.png
docs/reference/figures/README-unnamed-chunk-2-1.png
docs/reference/index.html
docs/reference/read_packedancestrymap.html
docs/reference/smart_mva-1.png
docs/reference/smart_mva.html
docs/reference/smart_pca-1.png
docs/reference/smart_pca-2.png
docs/reference/smart_pca.html
docs/reference/smart_permanova-1.png
docs/reference/smart_permanova.html
docs/reference/smart_permdisp-1.png
docs/reference/smart_permdisp.html
inst/.DS_Store
inst/extdata/dataSNP
inst/extdata/mallard_genotype_Kraus2012
inst/extdata/mallard_samples_Kraus2013
inst/extdata/mallard_snps_Kraus2013
man/figures/README-example-1.png
man/figures/README-pressure-1.png
man/figures/README-unnamed-chunk-2-1.png
man/read_packedancestrymap.Rd
man/smart_mva.Rd
man/smart_pca.Rd
man/smart_permanova.Rd
man/smart_permdisp.Rd
smartsnp.Rproj
src/.gitignore
src/RcppExports.cpp
src/cpp_read_packedancestrymap.cpp
vignettes/.DS_Store
vignettes/.gitignore
vignettes/Converting_VCF_and_PLINK_formats.Rmd
vignettes/Converting_VCF_and_PLINK_formats.Rmd.orig
vignettes/aDNA_smartpca_analysis.Rmd
vignettes/aDNA_smartpca_analysis.Rmd.orig
vignettes/figure/.DS_Store
vignettes/figure/data_transformation_example_plot-1.png
vignettes/figure/lazaridis_plot-1.png
vignettes/figure/pca_plot_mallard-1.png
vignettes/mallard_smartpca_analysis.Rmd
vignettes/mallard_smartpca_analysis.Rmd.orig
