API for CicciaLab/iSTOP
iSTOP - Induced STOP Experiment Design
| Global functions | |
|---|---|
| CDS | Man page Source code |
| CDS_Athaliana_BioMart_plantsmart28 | Man page Source code |
| CDS_Celegans_UCSC_ce11 | Man page Source code |
| CDS_Dmelanogaster_UCSC_dm6 | Man page Source code |
| CDS_Drerio_UCSC_danRer10 | Man page Source code |
| CDS_Hsapiens_UCSC_hg38 | Man page Source code |
| CDS_Mmusculus_UCSC_mm10 | Man page Source code |
| CDS_Rnorvegicus_UCSC_rn6 | Man page Source code |
| CDS_Scerevisiae_UCSC_sacCer3 | Man page Source code |
| CDS_example | Man page Source code |
| PAM_pattern | Man page Source code |
| PAM_patterns_default | Man page Source code |
| PAM_spacing | Man page Source code |
| Validate_CDS_args | Source code |
| add_RFLP | Man page Source code |
| are_colors | Source code |
| dna_reverse_complement | Source code |
| get_genomic_index | Source code |
| get_genomic_sequence | Source code |
| has | Man page |
| identify_RFLP_enzymes | Source code |
| locate_PAM | Man page Source code |
| locate_codons | Man page Source code |
| locate_codons_of_one_tx | Source code |
| match_one_seq | Source code |
| plot_spliced_isoforms | Man page Source code |
| process_enzymes | Source code |
| process_enzymes_c | Source code |
| process_enzymes_t | Source code |
| require_bioc_install | Source code |
| search_off_target | Man page Source code |
| search_off_target_chr | Source code |
| str_pad_if | Source code |
| str_to_lower_each | Source code |
