| add_RFLP | Add RFLP enzymes to iSTOP data |
| CDS | Generate a CDS coordinates table |
| has | Has a value |
| locate_codons | Locate codons in transcripts |
| locate_PAM | Locate PAM near a genomic coordinate |
| PAM_pattern | PAM patterns |
| PAM_spacing | PAM spacing specification |
| plot_spliced_isoforms | Plot spliced isoforms |
| search_off_target | Search for candidate off target sequences. |
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