Files in Core-Bioinformatics/feamiR
Classification and Feature Selection for microRNA/mRNA Interactions
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/classification.R
R/eGA.R
R/feamiR.R
R/feamiR_runningpython.R
R/forwardfeatureselection.R
R/hyperparameters.R
R/runallmodels.R
R/standardgeneticalgorithm.R
README.md
docs/404.html
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/figures/dtree_voting.png
docs/figures/eGA.png
docs/figures/feamiR Poster.pdf
docs/figures/feature_heatmap.png
docs/figures/ffs.png
docs/figures/kernel_hyperparameter.png
docs/figures/numtrees_hyperparameter.png
docs/figures/performance.png
docs/figures/rf_gini.png
docs/figures/statistical_heatmap.png
docs/figures/workflow.png
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Rplot001.png
docs/reference/Rplot002.png
docs/reference/Rplot003.png
docs/reference/decisiontree.html
docs/reference/dtreevoting.html
docs/reference/eGA.html
docs/reference/feamiR.html
docs/reference/forwardfeatureselection.html
docs/reference/geneticalgorithm.html
docs/reference/index.html
docs/reference/preparedataset.html
docs/reference/randomforest.html
docs/reference/rfgini.html
docs/reference/runallmodels-1.png
docs/reference/runallmodels-2.png
docs/reference/runallmodels-3.png
docs/reference/runallmodels.html
docs/reference/selectrfnumtrees-1.png
docs/reference/selectrfnumtrees-2.png
docs/reference/selectrfnumtrees-3.png
docs/reference/selectrfnumtrees.html
docs/reference/selectsvmkernel-1.png
docs/reference/selectsvmkernel-2.png
docs/reference/selectsvmkernel-3.png
docs/reference/selectsvmkernel.html
docs/reference/svm.html
docs/reference/svmlinear.html
docs/reference/svmpolynomial2.html
docs/reference/svmpolynomial3.html
docs/reference/svmpolynomial4.html
docs/reference/svmradial.html
docs/reference/svmsigmoid.html
feamiR.Rproj
inst/python/feamiR_prepare_dataset.py
inst/samples/subsamples/sample0.csv
inst/samples/subsamples/sample1.csv
inst/samples/subsamples/sample2.csv
inst/samples/subsamples/sample3.csv
inst/samples/subsamples/sample4.csv
inst/samples/test_seed_negative.csv
inst/samples/test_seed_positive.csv
man/decisiontree.Rd
man/dtreevoting.Rd
man/eGA.Rd
man/feamiR.Rd
man/forwardfeatureselection.Rd
man/geneticalgorithm.Rd
man/preparedataset.Rd
man/randomforest.Rd
man/rfgini.Rd
man/runallmodels.Rd
man/selectrfnumtrees.Rd
man/selectsvmkernel.Rd
man/svm.Rd
man/svmlinear.Rd
man/svmpolynomial2.Rd
man/svmpolynomial3.Rd
man/svmpolynomial4.Rd
man/svmradial.Rd
man/svmsigmoid.Rd
