Man pages for DARTH-git/darthtools
darthtools is an R package that contains tools developed by the Decision Analysis in R for Technologies in Health (DARTH) workgroup to construct model-based cost-effectiveness analysis in R.

add_common_aesAdds aesthetics to all plots to reduce code duplication
all_partsurvFit partitioned survival model on all combinations of chosen...
boot.hazBootstrap hazards
boot_haz_npNon-parametric hazard bootstrap 'boot_haz_np' computes...
boot_hrBootstrap hazards ratios of two survival models 'boot_hr'...
calc_prevalenceCalculate prevalence
calc_prop_sickerCalculate state-in-state proportions
calc_sickCalculate state proportions
calc_survCalculate survival probabilities
check_list_elementsCheck if the each item in the list contains information.
check_PFS_OSPrint a warning message if PFS > OS
check_sum_of_transition_arrayCheck if the sum of transition probabilities equal to one.
check_transition_probabilityCheck if transition array is valid
create_at_risk_tableFunction to create at-risk table.
cumhaz_to_hazConverts cumulative hazards to hazard rates
expected_survCalculate expected survival.
find_interval_limitsDetermine which rows the upper and lower values of each...
fit.funFit multiple survival models on survival data
fit.fun.cureFit multiple mixture cure models on survival data
fit.models.cureFit parametric mixture cure survival models for health...
fit.mstateFit multi-state model.
format_table_ceaFormat CEA table
gen_dataGenerate data for partitioned survival models (PFS and OS...
gen_wccWithin-cycle correction (WCC)
get_DARTH_colsGet DARTH colors
get_osGet operating system
hazard.fnCalculates hazards
labfunused to automatically label continuous scales
model.distCalculate survival probabilities given a survival...
model.rmvnormRandomly draw parameter values of survival models from...
normboot.hazBootstrap hazards
number_ticksNumber of ticks for 'ggplot2' plots
odds_to_probConvert a odds to a probability
partsurvFit partitioned survival model to survival data
plot_ceacPlot of Cost-Effectiveness Acceptability Curves (CEAC)
plot_evpiPlot of Expected Value of Perfect Information (EVPI)
plot_exp_lossPlot of Expected Loss Curves (ELC)
plot_icersPlot of ICERs
plot_prevalencePlot prevalence curve
plot_proportion_sickerPlot state-in-state proportion curve
plot_psaPlot the psa object
plot_survPlot survival curve
plot_tcPlot density of total cost
plot_tePlot density of total QALYs
plot_tracePlot cohort trace
plot_trace_microsimPlot cohort trace of a microsimulation model
plot_trace_microsim_shinyPlot cohort trace of a microsimulation model for the Shiny...
plot_trace_PSMPlot Markov trace from a partitioned survival model.
plot_trace_strategyPlot cohort trace per strategy
prob_to_oddsConvert a probability to an odds
prob_to_probConvert a probability to a probability with a different...
prob_to_rateConvert a probability to a rate
rate_to_probConvert a rate to a probability
runMLE.curerun MLE on cure models
samplevVectorized categorical distribution
surv_probCalculate survival probabilities.
surv_to_hazConvert survival probabilities to hazard rates.
trace.DESCompute Markov trace out of a multi-state model using DES.
trans_probCalculate transition probabilities.
trans_to_survConvert transition probabilities back to survival...
update_param_listUpdate parameters
DARTH-git/darthtools documentation built on April 3, 2025, 2:12 p.m.