Files in DE-Tisham/MultiPhen-Metabolomics
MultiPhen, a package for the genetic association testing of multiple phenotypes
.DS_Store
DESCRIPTION
DESCRIPTION~
NAMESPACE
R/MultiPhen-internal.R
R/MultiPhen-internal.R~
R/mPhen.R
R/mPhen.R~
R/mPhenIO.R
R/mPhenIO.R~
R/mPhenSimulate.R
R/zzz.R
README.md
build/vignette.rds
data/pheno.rda
data/snps.imputed.rda
data/snps.rda
demo/.RData
demo/.Rhistory
demo/00Index
demo/MultiPhen-demo.R
demo/MultiPhen-demo.R~
demo/Rplots.pdf
demo/assoc.R
demo/resultsDir/.opts_resultsBackwardSelection
demo/resultsDir/.opts_resultsJoint
demo/resultsDir/.opts_resultsJointG
demo/resultsDir/.opts_resultsSingle
demo/resultsDir/resultsBackwardSelection.fprint.pdf
demo/resultsDir/resultsBackwardSelection.heatm.pdf
demo/resultsDir/resultsBackwardSelection.long.txt
demo/resultsDir/resultsBackwardSelection.manh.pdf
demo/resultsDir/resultsBackwardSelection.qq.pdf
demo/resultsDir/resultsBackwardSelection.wide.txt
demo/resultsDir/resultsJoint.fprint.pdf
demo/resultsDir/resultsJoint.heatm.pdf
demo/resultsDir/resultsJoint.long.txt
demo/resultsDir/resultsJoint.manh.pdf
demo/resultsDir/resultsJoint.qq.pdf
demo/resultsDir/resultsJoint.wide.txt
demo/resultsDir/resultsJointG.fprint.pdf
demo/resultsDir/resultsJointG.heatm.pdf
demo/resultsDir/resultsJointG.long.txt
demo/resultsDir/resultsJointG.manh.pdf
demo/resultsDir/resultsJointG.qq.pdf
demo/resultsDir/resultsJointG.wide.txt
demo/resultsDir/resultsSingle.fprint.pdf
demo/resultsDir/resultsSingle.heatm.pdf
demo/resultsDir/resultsSingle.long.txt
demo/resultsDir/resultsSingle.manh.pdf
demo/resultsDir/resultsSingle.qq.pdf
demo/resultsDir/resultsSingle.wide.txt
inst/doc/MultiPhen.R
inst/doc/MultiPhen.Rnw
inst/doc/MultiPhen.pdf
man/MultiPhen-internal.Rd
man/MultiPhen-package.Rd
man/mPhen.Rd
man/mPhen.assoc.Rd
man/mPhen.cca.Rd
man/mPhen.defineOptions.Rd
man/mPhen.options.Rd
man/mPhen.plotCorrelation.Rd
man/mPhen.preparePheno.Rd
man/mPhen.readGenotypes.Rd
man/mPhen.readPhenoFiles.Rd
man/mPhen.sampleCovar.Rd
man/mPhen.sampleGeno.Rd
man/mPhen.simulate.Rd
man/mPhen.writeOutput.Rd
man/pheno.Rd
man/read.plink.Rd
man/snps.Rd
man/snps.imputed.Rd
vignettes/ALL.chr21.integrated.phase1.v3.20101123.snps.indels.svs.genotypes.extract.impute
vignettes/ALL.chr21.integrated.phase1.v3.20101123.snps.indels.svs.genotypes.extract.vcf.gz
vignettes/ALL.chr21.integrated.phase1.v3.20101123.snps.indels.svs.genotypes.extract.zip
vignettes/ALL.chr21.integrated_phase1_v3.20101123.snps_indels_svs.genotypes_extract.impute
vignettes/ALL.chr21.integrated_phase1_v3.20101123.snps_indels_svs.genotypes_extract.vcf.gz
vignettes/ALL.chr21.integrated_phase1_v3.20101123.snps_indels_svs.genotypes_extract.zip
vignettes/MultiPhen.Rnw
vignettes/hapmap2.bed
vignettes/hapmap2.bim
vignettes/hapmap2.fam
vignettes/pheno.txt
