Man pages for DanOvando/DLSA
Library Data Limited Stock Assessment Modules
| AddMissingFish | AddMissingFish adds in zero observations for missing fish |
| AgeAtLength | AgeAtLength returns the age at length for a Von Bert... |
| ApplyLifeHistoryError | ApplyLifeHistoryError Applies error to life history... |
| AssessLBSPRResiduals | Assess the residuals from the LBSPR function |
| BuildLBSPRPars | Build par file for LBSPR |
| CalculateCPUE | Calculate Catch Per Unit Effort |
| CalculateDensity | Calculate Density |
| CatchCurve | Run a Catch Curve |
| CheckLengthSampleSize | Check Sample Size |
| CPUERatio | Calculate CPUE Ratios |
| DBSRA | Depletion Based Stock Reduction Analysis |
| DeleteFiles | Delete ADMB output files |
| DensityRatio | Run Density Ratio |
| FindFishbase | FindFishbase |
| FormatCCFRPData | Format CCFRP Data |
| LBAR | Run LBAR |
| LBSPR | Run LBSPR |
| LengthAtAge | LengthAtAge |
| MapCCFRP | Map CCFRP Data |
| MaturityAtAge | MaturityAtAge |
| movingAverage | Calculate moving average |
| PlotCatchData | Plot Catch data |
| PlotCPUEData | Plot CPUE Data |
| PlotDensityData | Plot Density Data |
| PlotLengthData | Plot Length Data |
| PlotLifeHistory | Plot Life History |
| PredictKSlope | Predict the value of kslope parameter from the LM and Pars. |
| RunLBSPRAssessFun | A wrapper function to execute the ADMB optimization routine |
| run_ptcmsy | Run Pella-Tomlinson parameterized CatchMSY |
| selectivity | Calculate Selectivity |
| SimMod_AgeStruc | Generate size structure using GTG model and calculate... |
| SimMod_LHR | Generate size structure using GTG model and calculate... |
| SummaryPanel | Plot Summary Panels |
| UnishedDensity | UnfishedDensity |
| WriteDat | Write data file (.dat) for ADMB |
| WritePin | Write .pin file |
