Files in DavisWeaver/disruptr
Facilitate in-silico repression experiments on graph-structured data
.Rbuildignore
.Rhistory
.gitignore
DESCRIPTION
LICENSE.md
NAMESPACE
R/.Rhistory
R/RcppExports.R
R/calc_np.R
R/compute_null.R
R/data_ingest.R
R/disruptr-package.R
R/gdsc_helpers.R
R/node_suppression.R
R/pipeline.R
README.md
disruptr.Rproj
inst/test_data/EWS_NullDist.Rda
inst/test_data/EWS_final.Rda
inst/test_data/rld_Counts.csv
inst/test_data/sj_final.Rda
inst/test_data/stringdb.Rda
inst/test_data/toy_combine.Rda
inst/test_data/toy_graph.Rda
man/GDSC_repress.Rd
man/add_expression.Rd
man/bind_repression.Rd
man/calc_dnp_i.Rd
man/calc_exp.Rd
man/calc_gdsc_np.Rd
man/calc_np.Rd
man/calc_np_all.Rd
man/calc_np_all_legacy.Rd
man/calc_np_i.Rd
man/clean_dna.Rd
man/clean_expression.Rd
man/clean_gdsc.Rd
man/clean_meta.Rd
man/clean_output.Rd
man/clean_response.Rd
man/combine_null.Rd
man/compute_dnp.Rd
man/compute_np.Rd
man/compute_null.Rd
man/experiment_breakout.Rd
man/fcalc_np_all.Rd
man/get_dna.Rd
man/get_dr.Rd
man/get_exp.Rd
man/get_gdsc.Rd
man/get_meta.Rd
man/get_neighbors.Rd
man/get_random_graph.Rd
man/get_topn.Rd
man/load_ppi.Rd
man/node_repression.Rd
man/tidy_expression.Rd
src/.gitignore
src/RcppExports.cpp
src/calc_np.cpp
tests/testthat.R
tests/testthat/test-calc_np.R
tests/testthat/test-compute_null.R
tests/testthat/test-node_suppression.R
tests/testthat/test-null_model.R
tests/testthat/test-pipeline.R
