Files in DongyueXie/stm

Empirical Bayes Poisson Matrix Factorization

R/BMSM.R R/NMF_HALS.R R/cluster_mix.R R/ebbp_beta_mixture.R R/ebnm_smooth.R R/ebpmf_identity.R R/ebpmf_identity_init.R R/ebpmf_log.R R/ebpmf_log_controls.R R/ebpmf_log_flash_init.R R/ebpmf_log_flash_update.R R/ebpmf_log_init.R R/init_flashier.R R/simulate_poisson_matrix.R R/spmf.R R/summary_stm.R R/utils.R R/vga_solver_mat.R README.md inst/code/PMF_simu_study.R inst/code/Poisson_MF_splitting.R inst/code/Poisson_MF_splitting_init.R inst/code/adjLF.R inst/code/ebpmf_log.R inst/code/ebpmf_log_init.R inst/code/ebpmf_splitting.R inst/code/mKL.R inst/code/poisson2multinom.R inst/code/smash_gen_poiss.R inst/code/splitting_PMF_flashier_stable.R inst/code/splitting_PMF_flashr.R inst/code/splitting_PMF_original.R inst/code/stm.R man/BMSM.Rd man/NMF_HALS.Rd man/V_M.Rd man/adjLF.Rd man/adjust_var_shape.Rd man/bmsm_control_default.Rd man/calc_ebpmf_log_obj.Rd man/check_flash_signs.Rd man/cluster.mix.Rd man/ebbp_beta_mixture.Rd man/ebnm_dwt.Rd man/ebnm_dwt_haar.Rd man/ebnm_dwt_symlet.Rd man/ebnm_ndwt.Rd man/ebpmf_identity.Rd man/ebpmf_identity_init.Rd man/ebpmf_identity_smooth_control_default.Rd man/ebpmf_log.Rd man/ebpmf_log_flash_control_default.Rd man/ebpmf_log_flash_init.Rd man/ebpmf_log_flash_update.Rd man/ebpmf_log_init.Rd man/ebpmf_log_update_sigma2.Rd man/flash_extra_control.Rd man/get_var_b.Rd man/hello.Rd man/init.fn.fix.Rd man/log_for_ebmf.Rd man/mKL.Rd man/plot_stm.Rd man/poisson_to_multinom.Rd man/sim_data_log.Rd man/sim_data_log_simple.Rd man/sim_data_real.Rd man/spmf.Rd man/spmf_update_rank1.Rd man/stm_update_rank1.Rd man/sum_lfactorial_sparseMat.Rd man/test_ebnm_fn_sign.Rd man/vga_pois_solver_mat_newton.Rd man/vga_pois_solver_mat_newton_fixed_iter.Rd man/vga_pois_solver_mat_newton_low_memory.Rd tests/testthat.R tests/testthat/ebpmf_log_init_analysis.R tests/testthat/ebpmf_on_sla.R tests/testthat/real.R tests/testthat/test_ebpmf_identity.R tests/testthat/test_ebpmf_identity_real.R tests/testthat/test_ebpmf_log.R tests/testthat/test_flash_init.R tests/testthat/test_memory.R tests/testthat/test_mf_smooth.R vignettes/simple_example_stm.Rmd