Man pages for EDIorg/ecocomDP
Tools to Create, Use, and Convert ecocomDP Data
| annotation_dictionary | Annotations of published data |
| ants_L0_flat | Joined and flat version of EDI data package... |
| ants_L1 | The ecocomDP (L1) version of EDI data package... |
| calc_geo_extent_bounding_box_m2 | Calculate geo_extent_bounding_box_m2 for the dataset_summary... |
| calc_length_of_survey_years | Calculate length_of_survey_years for the dataset_summary... |
| calc_number_of_years_sampled | Calculate number_of_years_sampled for the dataset_summary... |
| calc_std_dev_interval_betw_years | Calculate std_dev_interval_betw_years for the dataset_summary... |
| convert_to_dwca | Convert a dataset to the Darwin Core Archive format |
| create_dataset_summary | Create the dataset_summary table |
| create_eml | Create EML metadata |
| create_location | Create the location table |
| create_location_ancillary | Create the location_ancillary table |
| create_observation | Create the observation table |
| create_observation_ancillary | Create the observation_ancillary table |
| create_taxon | Create the taxon table |
| create_taxon_ancillary | Create the taxon_ancillary table |
| create_variable_mapping | Create the variable_mapping table |
| flatten_data | Flatten a dataset |
| plot_sample_space_time | Plot dates and times samples were collected or observations... |
| plot_sites | Plot sites on US map |
| plot_taxa_abund | Plot mean taxa abundances per 'observation_id' |
| plot_taxa_accum_sites | Plot taxa accumulation by site accumulation |
| plot_taxa_accum_time | Plot taxa accumulation through time |
| plot_taxa_diversity | Plot diversity (taxa richness) through time |
| plot_taxa_occur_freq | Plot taxon occurrence frequencies |
| plot_taxa_rank | Plot taxa ranks |
| plot_taxa_sample_time | Plot dates and times samples were taken (DEPRECATED) |
| plot_taxa_shared_sites | Plot number of unique taxa shared across sites |
| read_data | Read published data |
| save_data | Save a dataset |
| search_data | Search published data |
| validate_data | Validate tables against the model |
| write_tables | Write tables to file |
