Files in Eliot-RUIZ/eDNAevaluation

Metabarcodes Evaluation

R/accession_2_bin.R R/add_infos.R R/algaebase_taxonomy.R R/auto_name_choice.R R/change_infos.R R/check_if_fragment_in_gene.R R/complete_taxonomy.R R/consensus_deduplification.R R/consensus_ecology.R R/correct_name_and_infos.R R/csv_2_gen_2_sql.R R/decipher_in_silico_pcr.R R/decipher_rapid_alignment.R R/division_ecology.R R/evaluate_primers.R R/evaluation_plot.R R/filter_pcr_amplicons.R R/fishbase_ecology.R R/gene_extraction.R R/gene_position.R R/get_taxa_missing_1_infos.R R/id_to_classification.R R/inter_bin_analysis.R R/intra_taxa_analysis.R R/intra_taxa_similarity.R R/metabarcode_extraction.R R/multiple_databases_ecology.R R/multiple_evaluations.R R/multiple_resolution_analysis.R R/pairwise_similarity.R R/rbind_multiple_files.R R/remove_primers_blindly.R R/replace_manual_taxo_infos.R R/replace_row_na.R R/replace_values.R R/restore_changed_names.R R/view_metabarcodes.R R/visualize_database.R R/worms_ecology.R R/worms_ecology_upper_taxa.R README.md