Files in Elisa89m/PDSP
Phenotypic Drug Similarity Prediction
.Rbuildignore
.gitignore
DESCRIPTION
GeneExpr/DEGResult_Dasatinib.txt
GeneExpr/DEGResult_Erlotinib.txt
GeneExpr/DEGResult_Sunitinib.txt
NAMESPACE
PDSP.Rproj
R/DrugInfo_class.R
R/DrugSimilarityPredictiction.R
R/SimilarityScoreFunctions.R
R/methods.R
README.md
Results/Test_2019-01-22/ResultPredicted.tab
Results/Test_2019-01-22/sdf/Dasatinib_3062316.sdf
Results/Test_2019-01-22/sdf/Erlotinib_176870.sdf
Results/Test_2019-01-22/sdf/Famciclovir_3324.sdf
Results/Test_2019-01-22/sdf/Sunitinib_5329102.sdf
data/ATC_Cmap.rda
data/Bioassay.rda
data/CMAP_DrugSimilarityPrediction.rda
data/PMID_Cmap.rda
data/PredictiveModel.rda
data/apsetCMAP.rda
data/geneExprCMAP_1.rda
data/geneExprCMAP_2.rda
data/geneExprCMAP_3.rda
data/geneExprCMAP_4.rda
data/keggDCmap.rda
data_example.conf
man/AP_sim2comp.Rd
man/AP_simCMAP.Rd
man/DrugInfoCMAP-class.Rd
man/GetATCcodeScore.Rd
man/GetAllSimilarityScores.Rd
man/GetAllSimilarityScoresCMAP.Rd
man/GetGeneExprScore.Rd
man/GetKEGGScore.Rd
man/GetLitteratureCo_occ.Rd
man/LoadModelData.Rd
man/LoadPackage.Rd
man/OrderCompound.Rd
man/PredictNewDrugSimilarity.Rd
man/UploadAllData.Rd
man/geneExpr_upload.Rd
man/get_pmid.Rd
man/get_sdf.Rd
man/makeResultsDirectory.Rd
man/readDrugInfo.Rd
