Man pages for ElliotDovers/scampr
Spatially Correlated, Approximate Modelling of Point patterns in R

AIC.scamprAkaike's Information Criteria for objects of class 'scampr'....
basis.searchSearch algorithm for simple 2D basis functions configurations...
basis.search.paSearch algorithm for simple 2D basis functions configurations...
basis.search.poSearch algorithm for simple 2D basis functions configurations...
BIC.scamprWrapper for Akaike's Information Criteria for objects of...
boundCalculate the approximate boundary of 2D Euclidean data
estimate.correlation.rangeEstimates the effective correlation range of fields from a...
floraBlue Mountains flora, environmental and site accessibility...
get.bf.matrixInternal scampr function that calculates the basis function...
getCall.scamprgetCall function for objects of class 'scampr'
get.design.matrixInternal scampr function that creates a fixed effect design...
get.offsetInternal scampr function that creates a fixed effect offset...
get.TMB.data.inputInternal scampr function that creates a list of data and...
gorillasGorilla Nesting Sites
image.scamprPlot the image of a field over a model quadrature ### WIP ###
kfuncInhomogeneous K function for scampr models (is a wrapper of...
kfunc_envelopesPerform simulations from a scampr model to calculate global...
logLik.scamprMarginal log-likelihood for objects of class 'scampr'
make.objective.functionInternal scampr function that uses TMB to make the objective...
make.spatial.foldsPartition data into k spatially blocked folds for cross...
plot_basisPlot basis functions for objects of class 'bf.df' ### WIP ###
plot.scamprPlot diagnositcs for objects of class 'scampr' ### WIP ###
plot_searchPlot basis function search results - for objects of class...
predict.scamprPredict function for objects of class 'scampr'
print.scamprPrint for objects of class 'scampr'
prune_simple_basisPruning for regular grids of bi-square basis functions in...
residuals.scamprExtract Model Residuals for objects of class 'scampr' ### WIP...
ROxygenTagsRoxygen commands
scamprSpatially correlated, approximate modelling of presences in R
simple_basisCreate a single resolution, regular grid of basis function...
simulate.scamprSimulate functiion for objects of class scampr
summary.scamprSummary for objects of class 'scampr'
update.starting.parametersInternal scampr function that gets warm starting parameters...
vcov.scamprvcov for objects of class 'scampr'
vec2imInternal scampr function that converts a vector to spatstat...
vec2matInternal scampr function that converts a vector to matrix...
ElliotDovers/scampr documentation built on March 17, 2024, 3:27 p.m.