Man pages for EricMarcon/entropart
Entropy Partitioning to Measure Diversity
| AbdFreqCount | Abundance Frequency Count of a Community |
| Accumulation | Diversity accumulation. |
| AllenH | Phylogenetic Entropy of a Community |
| AlphaDiversity | Reduced-bias alpha diversity of a metacommunity |
| AlphaEntropy | Reduced-bias alpha entropy of a metacommunity |
| ArgumentOriginalName | Finds the original value (name of expression) of the argument... |
| BetaDiversity | Reduced-bias beta diversity of a metacommunity |
| BetaEntropy | Reduced-bias beta entropy of a metacommunity |
| ChaoPD | Phylogenetic Diversity of a Community |
| CheckentropartArguments | Checks the arguments of a function of the package entropart |
| CommunityProfile | Diversity or Entropy Profile of a community |
| Coverage | Sample coverage of a community |
| Diversity | Hill number of a community |
| DivEst | Diversity Estimation of a metacommunity |
| DivPart | Diversity Partition of a metacommunity |
| DivProfile | Diversity Profile of a metacommunity |
| Dqz | Similarity-based diversity of a community |
| EightSpAbundance | Abundances of 8 species to run examples. |
| EightSpTree | Functional tree with 8 species. |
| Enq | Grassberger's expectation of n^q |
| entropart-package | Entropy Partitioning to Measure Diversity |
| EntropyCI | Entropy of Monte-Carlo simulated communities |
| expq | Exponential of order q |
| GammaDiversity | Reduced-bias gamma diversity of a metacommunity |
| GammaEntropy | Reduced-bias gamma entropy of a metacommunity |
| GenSimpson | Generalized Simpson's Entropy and Diversity |
| Hqz | Similarity-based entropy of a community |
| HqzBeta | Similarity-based beta entropy of a community |
| Hurlbert | Hurlbert's Index and Explicit Diversity |
| KLq | Generalized Kullback-Leibler divergence |
| lnq | Logarithm of order q |
| MCdiversity | Meta-Community diversity class. |
| MCentropy | Meta-Community entropy class. |
| mergeandlabel | Merge community data |
| MergeMC | Manipulation of meta-communities |
| MetaCommunity | Metacommunity class |
| Optimal.Similarity | Optimal scale parameter to transform a distance matrix into a... |
| Paracou618.dist | Functional distances between pairs of species of Paracou... |
| Paracou618.Functional | Functional tree of species of Paracou field station plots 6... |
| Paracou618.MC | Paracou field station plots 6 and 18, two 1-ha plots... |
| Paracou618.Taxonomy | Taxonomy (Family - Genus - Species) of Paracou field station... |
| PDFD | Phylogenetic Diversity / Functional Diversity of a Community |
| PhyloApply | Apply a Function over a Phylogenetic Tree |
| PhyloBetaEntropy | Phylogenetic Beta Entropy of a community |
| PhyloDiversity | Phylogenetic Diversity of a Community |
| PhyloEntropy | Phylogenetic Entropy of a community |
| PhyloValue | Phylogenetic entropy or diversity. |
| PPtree | Preprocessed Trees. |
| Preprocess.MC | Preprocessing of metacommunity data |
| Preprocess.Tree | Preprocessing of a phylogenetic tree |
| RAC | Fit Distributions to Well-Known Rank Abundance Curves. |
| Rao | Rao Quadratic Entropy of a Community |
| rCommunity | Random Communities |
| reexports | Objects exported from other packages |
| Richness | Number of species of a community |
| Shannon | Shannon entropy of a community |
| ShannonBeta | Shannon beta entropy of a community |
| Simpson | Simpson entropy of a community |
| SimpsonBeta | Simpson beta entropy of a community |
| SimTest | SimTest class |
| SpeciesDistribution | Species Distributions |
| Tsallis | Tsallis (HCDT) Entropy of a community |
| TsallisBeta | Tsallis beta entropy of a community |
