FangtingZhou/csNet: Cell-specific Gene Regulatory Network Construction via Latent Trajectory

The package provides dynamic gene regulatory network construction derived from single-cell RNA sequencing data. The construction is based on simultaneous equation model with varying coefficients. The inference is done within a Bayesian framework and calculations are performed with Markov chain Monte Carlo.

Getting started

Package details

AuthorFangting Zhou [aut, cre]
MaintainerFangting Zhou <fangtingzhou@tamu.edu>
LicenseGPL-3
Version1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("FangtingZhou/csNet")
FangtingZhou/csNet documentation built on Dec. 11, 2019, 4:59 p.m.