Files in FelixErnst/EpiTxDb
Storing and accessing epitranscriptomic information using the AnnotationDbi interface
.Rbuildignore
.github/.gitignore
.github/workflows/check-bioc-devel.yml
.github/workflows/check-bioc.yml
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/AllGenerics.R
R/EpiTxDb-SELECT-helpers.R
R/EpiTxDb-class.R
R/EpiTxDb-schema.R
R/EpiTxDb.R
R/makeEpiTxDb.R
R/makeEpiTxDbFromGRanges.R
R/makeEpiTxDbFromRMBase.R
R/makeEpiTxDbFromtRNAdb.R
R/modifications.R
R/modificationsBy.R
R/ranges-helpers.R
R/select-methods.R
R/shiftGenomicToTranscript.R
README.md
_pkgdown.yml
codecov.yml
data/rmbase_data.rda
inst/CITATION
inst/extdata/EpiTxDb.Hs.hg38.snoRNAdb.sqlite
inst/extdata/RMBase_testdata.txt.gz
man/EpiTxDb-class.Rd
man/EpiTxDb-data.Rd
man/EpiTxDb-package-hash-single-quote.Rd
man/EpiTxDb-package.Rd
man/makeEpiTxDb.Rd
man/makeEpiTxDbFromGRanges.Rd
man/makeEpiTxDbFromRMBase.Rd
man/makeEpiTxDbFromtRNAdb.Rd
man/modifications.Rd
man/positionSequence.Rd
man/rescale.Rd
man/select.Rd
man/shiftGenomicToTranscript.Rd
tests/testthat.R
tests/testthat/test-0EpiTxDb.R
tests/testthat/test-0select.R
tests/testthat/test-1ranges-helpers.R
tests/testthat/test-2makeEpiTxDb.R
tests/testthat/test-3modifications.R
tests/testthat/test-4makeEpiTxDbFromGRanges.R
tests/testthat/test-4makeEpiTxDbFromRMBase.R
tests/testthat/test-4makeEpiTxDbFromtRNAdb.R
tests/testthat/test-5shiftGenomicToTranscript.R
vignettes/EpiTxDb-creation.Rmd
vignettes/EpiTxDb.Rmd
vignettes/references.bib
