API for Fraternalilab/BrepPhylo
BrepPhylo: R package for phylogenetic analysis of B cell repertoire
| Global functions | |
|---|---|
| .onLoad | Source code |
| GermlineLikeness | Man page Source code |
| IgPhyML | Man page Source code |
| Vgermline | Man page |
| Vgermline_gapped | Man page |
| addCloneToCompleted | Man page Source code |
| alignmentValidCodons | Man page Source code |
| cloneArborescence | Man page Source code |
| cloneLineage | Man page Source code |
| convertDNAStringSetToList | Man page Source code |
| curDateTime | Man page Source code |
| doBatchCloneAnalysis | Man page Source code |
| getArborescence | Man page Source code |
| getCSEvents | Man page Source code |
| getColourVectorFromLevels | Man page Source code |
| getDistPercentile | Man page Source code |
| getDistancesFromTree | Man page Source code |
| getGermlineDistance | Man page Source code |
| getGermlineLikeness | Man page Source code |
| getSummaryFromBatch | Man page Source code |
| is.valid.IsotypeSwitch | Man page Source code |
| makeAlignmentPDF | Man page Source code |
| msaPrettyPrint_extended | Man page |
| plotCSRsummary | Man page Source code |
| summariseCSR | Man page Source code |
| summariseGermlineDistance | Man page Source code |
