| basis_functions | Creation of basis functions |
| bold5000 | BOLD5000 neuroimaging data |
| cpmrf2d | Conditional probabilities in a pixel position |
| data_examples | Example Data |
| dplot | Plotting functions for lattice data |
| fit_ghm | EM estimation for Gaussian Hidden Markov field |
| fit_pl | Maximum Pseudo-likelihood fitting of MRFs on 2d lattices. |
| fit_sa | Stochastic Approximation fitting of MRFs on 2d lattices |
| hmrfout | MRF fitting functions output |
| mrf2d-family | Parameter restriction families |
| mrf2d-package | mrf2d: Markov Random Field Models for Image Analysis |
| mrfi-class | mrfi: MRF interaction structure |
| mrfout | MRF fitting functions output |
| pl_mrf2d | Pseudo-likelihood function for MRFs on 2d lattices |
| plot.mrfi | Plotting of 'mrfi' objects. |
| rmrf2d | Sampling of Markov Random Fields on 2d lattices |
| rmrf2d_mc | Markov Chain sampling of MRFs for Monte-Carlo methods |
| smr_array | Summarized representation of theta arrays |
| smr_stat | Summary Statistics |
| Z_potts | Example objects from 'mrf2d' |
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