Files in GaoGN517/689_SNPFastImpute_Mac
Perform fast missing value imputation for single nucleotide polymorphism data.
.Rbuildignore
.Rproj.user/EBD332CC/console06/INDEX001
.Rproj.user/EBD332CC/pcs/files-pane.pper
.Rproj.user/EBD332CC/pcs/source-pane.pper
.Rproj.user/EBD332CC/pcs/windowlayoutstate.pper
.Rproj.user/EBD332CC/pcs/workbench-pane.pper
.Rproj.user/EBD332CC/sources/prop/2CE6DDD2
.Rproj.user/EBD332CC/sources/prop/INDEX
.Rproj.user/shared/notebooks/patch-chunk-names
.Rproj.user/shared/notebooks/paths
.gitignore
DESCRIPTION
Meta/vignette.rds
NAMESPACE
R/Create_SNP_XGBoost_Object_function.R
R/Generate_NA.R
R/Impute_Genotype_XGBoost_function.R
R/classification_error_function.R
R/vcf2df.R
README.md
SNPFastImputeMac.Rproj
data/SNP_NA_df005.rda
data/SNP_NA_df02.rda
data/SNP_orig_sub.rda
data/Test.vcf
data/Test_df.rda
data/full_vcf.rda
data/vcf_df.rda
doc/SNP_missing_value_imputation_process.R
doc/SNP_missing_value_imputation_process.Rmd
doc/SNP_missing_value_imputation_process.html
man/Create_SNP_XGBoost_Object.Rd
man/Create_Single_SNP_Object.Rd
man/Impute_GenoType_XGBoost.Rd
man/Impute_GenoType_XGBoost_para.Rd
man/NA_Generator.Rd
man/SNPFastImpute-package.Rd
man/classification_error.Rd
man/vcf2df.Rd
vignettes/.gitignore
vignettes/SNP_missing_value_imputation_process.Rmd
vignettes/SNP_missing_value_imputation_process_cache/html/__packages
vignettes/SNP_missing_value_imputation_process_cache/html/predict for different missing ratio_8907fcdf88b5880de4d54eb273808ba5.RData
vignettes/SNP_missing_value_imputation_process_cache/html/predict for different missing ratio_8907fcdf88b5880de4d54eb273808ba5.rdb
vignettes/SNP_missing_value_imputation_process_cache/html/predict for different missing ratio_8907fcdf88b5880de4d54eb273808ba5.rdx
vignettes/SNP_missing_value_imputation_process_cache/html/predict for different windows size_694685547ae81bd4092d7c92439efe17.RData
vignettes/SNP_missing_value_imputation_process_cache/html/predict for different windows size_694685547ae81bd4092d7c92439efe17.rdb
vignettes/SNP_missing_value_imputation_process_cache/html/predict for different windows size_694685547ae81bd4092d7c92439efe17.rdx
vignettes/SNP_missing_value_imputation_process_files/figure-html/plot missing ratio vs error rate and time-1.png
vignettes/SNP_missing_value_imputation_process_files/figure-html/plot windows size vs error rate and time-1.png
