API for GuangchuangYu/GOSemSim
GO-terms Semantic Similarity Measures
| Global functions | |
|---|---|
| .initial | Source code |
| .onAttach | Source code |
| GO | Man page |
| GOSemSim | Man page |
| GOSemSim-package | Man page |
| GOSemSimDATA-class | Man page |
| ancestors_envir | Source code |
| ancestors_in_common | Source code |
| buildGOmap | Man page Source code |
| buildGOmap2 | Source code |
| buildGOmap_internal | Source code |
| calc_auc_F1_score | Source code |
| calc_maxIC | Source code |
| check_goAnno | Source code |
| clusterSim | Man page Source code |
| combineScores | Man page Source code |
| computeIC | Source code |
| computeICT | Source code |
| computePre | Source code |
| create_filtered_ppidata | Source code |
| create_meta_terms | Source code |
| create_sub_terms | Source code |
| decide_cutoff | Source code |
| gene2GO | Source code |
| geneSim | Man page Source code |
| getAncestors | Source code |
| getOffsprings | Source code |
| getParents | Source code |
| getSV | Source code |
| get_gosemsim_env | Source code |
| get_onto_data | Source code |
| get_rel_df | Source code |
| goSim | Man page Source code |
| go_term_table | Man page |
| godata | Man page Source code |
| goid2term | Source code |
| gotbl | Man page |
| infoContentMethod | Man page Source code |
| infoContentMethod_cpp | Source code |
| is.empty | Source code |
| load_OrgDb | Man page Source code |
| load_onto | Source code |
| mclusterSim | Man page Source code |
| mgeneSim | Man page |
| mgoSim | Man page Source code |
| parse_gff | Man page |
| parse_orgDb | Source code |
| prepare_relation_df | Source code |
| process_tcss | Source code |
| read.blast2go | Man page Source code |
| read.gaf | Man page Source code |
| read.gaf2 | Source code |
| remove_close | Source code |
| show,GOSemSimDATA-method | Man page |
| tcssMethod | Source code |
| tcssMethod_internal | Source code |
| tcss_cutoff | Man page Source code |
| termSim | Man page Source code |
| wangMethod | Source code |
| wangMethod_internal | Man page Source code |
