Files in GuangshengPei/deCS
Cell type enrichment analysis
DESCRIPTION
Example_code/1.1.PBMC.R
Example_code/1.1.PBMC_single_cell.R
Example_code/1.2.Bronchoalveolar_immune_cells.R
Example_code/1.2.Bronchoalveolar_immune_cells_single_cell.R
Example_code/1.3.Cardiac_cells.R
Example_code/2.1.iPSC-derived_neurons.R
Example_code/2.2.iPSC-derived_chondrocytes.R
Example_code/3.GWAS_trait_associate_genes.R
Example_data/1.1.PBMC/hg19/barcodes.tsv
Example_data/1.1.PBMC/hg19/genes.tsv
Example_data/1.1.PBMC/hg19/matrix.mtx
Example_data/1.1.PBMC/pbmc_example.rda
Example_data/1.2.Bronchoalveolar_immune_cells/BIC_cell_info.rda
Example_data/1.2.Bronchoalveolar_immune_cells/BIC_cluster.rda
Example_data/1.2.Bronchoalveolar_immune_cells/BIC_single_cell_marker.rda
Example_data/1.2.Bronchoalveolar_immune_cells/BIC_single_cell_top2k.rda
Example_data/1.3.Cardiac_cells/Cardiac_cells.rda
Example_data/2.1.iPSC-derived_neurons/Neuron_TPM.txt
Example_data/2.2.iPSC-derived_chondrocytes/Chondrocytes_TPM.txt
Example_data/3.GWAS_trait_associate_genes/TAG.txt
LICENSE.md
NAMESPACE
R/deCS.R
README.md
Shiny_app/deCS_cor/app.R
Shiny_app/deCS_cor/rsconnect/shinyapps.io/gpei/decs_cor.dcf
Shiny_app/pbmc_downsampled.rds
build/partial.rdb
data/BlueprintEncode_fine.rda
data/BlueprintEncode_main.rda
data/CellMatch.rda
data/DICE_fine.rda
data/DICE_main.rda
data/Human_cell_atlas_of_fetal.rda
data/Human_cell_landscape.rda
data/MonacoImmune_fine.rda
data/MonacoImmune_main.rda
data/datalist
deCS_1.0.tar.gz
man/deCS-package.Rd
man/deCS.correlation.Rd
man/deCS.fisher.Rd
