Files in HaikunXu/RegressionTree
IATTC's regression tree R package for analyzing size frequency data
.Rbuildignore
.gitignore
DESCRIPTION
FishFreqTree.Rproj
LICENSE.md
NAMESPACE
R/evaluate.regression.tree.R
R/find_split.R
R/get.klderror.null.R
R/imp.kld.FINAL.R
R/lf.aggregate.R
R/lf.demean.R
R/loop.regression.tree.R
R/make.Us.areaflags.R
R/make.lf.cell.R
R/make.lf.map.R
R/make.meanl.map.R
R/make.split.map.R
R/rename_CQrt.R
R/run.regression.tree.R
R/simulate.tree.kld.FINAL.R
README.md
data/LF.RData
man/evaluate_regression_tree.Rd
man/find_split.Rd
man/get.klderror.null.Rd
man/imp.kld.FINAL.R.Rd
man/lf.aggregate.Rd
man/lf.demean.Rd
man/loop_regression_tree.Rd
man/make.Us.areaflags.f.Rd
man/make.lf.cell.Rd
man/make.lf.map.Rd
man/make.meanl.map.Rd
man/make.split.map.Rd
man/rename_CQrt.Rd
man/run_regression_tree.Rd
man/simult.tree.kld.FINAL.Rd
manual/111/Record.csv
manual/111/improvement-split1.csv
manual/111/improvement-split2.csv
manual/111/improvement-split3.csv
manual/111/split1(annual maps for years 31-64).png
manual/111/split1(latlon).png
manual/111/split1(lf).png
manual/111/split1(quarterly maps for years 31-64).png
manual/111/split1.csv
manual/111/split2(annual map for years 31-64).png
manual/111/split2(latlon).png
manual/111/split2(lf).png
manual/111/split2(quarterly map for years 31-64).png
manual/111/split2.csv
manual/111/split3(annual map for years 31-64).png
manual/111/split3(latlon).png
manual/111/split3(lf).png
manual/111/split3(quarterly map for years 31-64).png
manual/111/split3.csv
manual/121/Record.csv
manual/121/improvement-split1.csv
manual/121/improvement-split2.csv
manual/121/improvement-split3.csv
manual/121/split1(annual maps for years 31-64).png
manual/121/split1(latlon).png
manual/121/split1(lf).png
manual/121/split1(quarterly maps for years 31-64).png
manual/121/split1.csv
manual/121/split2(annual map for years 31-64).png-hkxu1
manual/121/split2(latlon).png
manual/121/split2(lf).png
manual/121/split2(quarterly map for years 31-64).png
manual/121/split2.csv
manual/121/split3(annual map for years 31-64).png
manual/121/split3(latlon).png
manual/121/split3(lf).png
manual/121/split3(quarterly map for years 31-64).png
manual/121/split3.csv
manual/LF.RData
manual/LF_map.png
manual/Manual.Rmd
manual/Manual.aux
manual/Manual.out
manual/Manual.pdf
manual/MeanL.csv
manual/MeanL_map.png
manual/Split_map.png
manual/loop/111/Record.csv
manual/loop/111/Record.csv-hkxu1
manual/loop/111/improvement-split1.csv
manual/loop/111/improvement-split1.csv-hkxu1
manual/loop/111/improvement-split2.csv
manual/loop/111/improvement-split2.csv-hkxu1
manual/loop/111/improvement-split3.csv
manual/loop/111/improvement-split3.csv-hkxu1
manual/loop/111/split1(annual maps for years 31-64).png
manual/loop/111/split1(annual maps for years 31-64).png-hkxu1
manual/loop/111/split1(latlon).png
manual/loop/111/split1(latlon).png-hkxu1
manual/loop/111/split1(lf).png
manual/loop/111/split1(lf).png-hkxu1
manual/loop/111/split1(quarterly maps for years 31-64).png
manual/loop/111/split1(quarterly maps for years 31-64).png-hkxu1
manual/loop/111/split1.csv
manual/loop/111/split1.csv-hkxu1
manual/loop/111/split2(annual map for years 31-64).png
manual/loop/111/split2(annual map for years 31-64).png-hkxu1
manual/loop/111/split2(latlon).png
manual/loop/111/split2(latlon).png-hkxu1
manual/loop/111/split2(lf).png
manual/loop/111/split2(lf).png-hkxu1
manual/loop/111/split2(quarterly map for years 31-64).png
manual/loop/111/split2(quarterly map for years 31-64).png-hkxu1
manual/loop/111/split2.csv
manual/loop/111/split2.csv-hkxu1
manual/loop/111/split3(annual map for years 31-64).png
manual/loop/111/split3(annual map for years 31-64).png-hkxu1
manual/loop/111/split3(latlon).png
manual/loop/111/split3(latlon).png-hkxu1
manual/loop/111/split3(lf).png
manual/loop/111/split3(lf).png-hkxu1
manual/loop/111/split3(quarterly map for years 31-64).png
manual/loop/111/split3(quarterly map for years 31-64).png-hkxu1
manual/loop/111/split3.csv
manual/loop/111/split3.csv-hkxu1
manual/loop/112/Record.csv
manual/loop/112/Record.csv-hkxu1
manual/loop/112/improvement-split1.csv
manual/loop/112/improvement-split1.csv-hkxu1
manual/loop/112/improvement-split2.csv
manual/loop/112/improvement-split2.csv-hkxu1
manual/loop/112/improvement-split3.csv
manual/loop/112/improvement-split3.csv-hkxu1
manual/loop/112/split1(annual maps for years 31-64).png
manual/loop/112/split1(annual maps for years 31-64).png-hkxu1
manual/loop/112/split1(latlon).png
manual/loop/112/split1(latlon).png-hkxu1
manual/loop/112/split1(lf).png
manual/loop/112/split1(lf).png-hkxu1
manual/loop/112/split1(quarterly maps for years 31-64).png
manual/loop/112/split1(quarterly maps for years 31-64).png-hkxu1
manual/loop/112/split1.csv
manual/loop/112/split1.csv-hkxu1
manual/loop/112/split2(annual map for years 31-64).png
manual/loop/112/split2(annual map for years 31-64).png-hkxu1
manual/loop/112/split2(latlon).png
manual/loop/112/split2(latlon).png-hkxu1
manual/loop/112/split2(lf).png
manual/loop/112/split2(lf).png-hkxu1
manual/loop/112/split2(quarterly map for years 31-64).png-hkxu1
manual/loop/112/split2.csv
manual/loop/112/split2.csv-hkxu1
manual/loop/112/split3(annual map for years 31-64).png
manual/loop/112/split3(annual map for years 31-64).png-hkxu1
manual/loop/112/split3(latlon).png
manual/loop/112/split3(latlon).png-hkxu1
manual/loop/112/split3(lf).png
manual/loop/112/split3(lf).png-hkxu1
manual/loop/112/split3(quarterly map for years 31-64).png
manual/loop/112/split3(quarterly map for years 31-64).png-hkxu1
manual/loop/112/split3.csv
manual/loop/112/split3.csv-hkxu1
manual/loop/121/Record.csv
manual/loop/121/improvement-split1.csv
manual/loop/121/improvement-split2.csv
manual/loop/121/improvement-split3.csv
manual/loop/121/split1(annual maps for years 31-64).png
manual/loop/121/split1(latlon).png
manual/loop/121/split1(lf).png
manual/loop/121/split1(quarterly maps for years 31-64).png
manual/loop/121/split1.csv
manual/loop/121/split2(annual map for years 31-64).png
manual/loop/121/split2(latlon).png
manual/loop/121/split2(lf).png
manual/loop/121/split2(quarterly map for years 31-64).png
manual/loop/121/split2.csv
manual/loop/121/split3(annual map for years 31-64).png
manual/loop/121/split3(latlon).png
manual/loop/121/split3(lf).png
manual/loop/121/split3(quarterly map for years 31-64).png
manual/loop/121/split3.csv
manual/loop/122/Record.csv
manual/loop/122/Record.csv-hkxu1
manual/loop/122/improvement-split1.csv
manual/loop/122/improvement-split1.csv-hkxu1
manual/loop/122/improvement-split2.csv
manual/loop/122/improvement-split2.csv-hkxu1
manual/loop/122/improvement-split3.csv
manual/loop/122/improvement-split3.csv-hkxu1
manual/loop/122/split1(annual maps for years 31-64).png
manual/loop/122/split1(annual maps for years 31-64).png-hkxu1
manual/loop/122/split1(latlon).png
manual/loop/122/split1(latlon).png-hkxu1
manual/loop/122/split1(lf).png
manual/loop/122/split1(lf).png-hkxu1
manual/loop/122/split1(quarterly maps for years 31-64).png
manual/loop/122/split1(quarterly maps for years 31-64).png-hkxu1
manual/loop/122/split1.csv
manual/loop/122/split1.csv-hkxu1
manual/loop/122/split2(annual map for years 31-64).png
manual/loop/122/split2(annual map for years 31-64).png-hkxu1
manual/loop/122/split2(latlon).png
manual/loop/122/split2(latlon).png-hkxu1
manual/loop/122/split2(lf).png
manual/loop/122/split2(lf).png-hkxu1
manual/loop/122/split2(quarterly map for years 31-64).png
manual/loop/122/split2(quarterly map for years 31-64).png-hkxu1
manual/loop/122/split2.csv
manual/loop/122/split2.csv-hkxu1
manual/loop/122/split3(annual map for years 31-64).png
manual/loop/122/split3(annual map for years 31-64).png-hkxu1
manual/loop/122/split3(latlon).png
manual/loop/122/split3(latlon).png-hkxu1
manual/loop/122/split3(lf).png
manual/loop/122/split3(lf).png-hkxu1
manual/loop/122/split3(quarterly map for years 31-64).png
manual/loop/122/split3(quarterly map for years 31-64).png-hkxu1
manual/loop/122/split3.csv
manual/loop/122/split3.csv-hkxu1
manual/loop/211/Record.csv
manual/loop/211/Record.csv-hkxu1
manual/loop/211/improvement-split1.csv
manual/loop/211/improvement-split1.csv-hkxu1
manual/loop/211/improvement-split2.csv
manual/loop/211/improvement-split2.csv-hkxu1
manual/loop/211/improvement-split3.csv
manual/loop/211/improvement-split3.csv-hkxu1
manual/loop/211/split1(annual maps for years 31-64).png-hkxu1
manual/loop/211/split1(latlon).png
manual/loop/211/split1(latlon).png-hkxu1
manual/loop/211/split1(lf).png
manual/loop/211/split1(lf).png-hkxu1
manual/loop/211/split1(quarterly maps for years 31-64).png
manual/loop/211/split1(quarterly maps for years 31-64).png-hkxu1
manual/loop/211/split1.csv
manual/loop/211/split1.csv-hkxu1
manual/loop/211/split2(annual map for years 31-64).png
manual/loop/211/split2(annual map for years 31-64).png-hkxu1
manual/loop/211/split2(latlon).png
manual/loop/211/split2(latlon).png-hkxu1
manual/loop/211/split2(lf).png
manual/loop/211/split2(lf).png-hkxu1
manual/loop/211/split2(quarterly map for years 31-64).png
manual/loop/211/split2(quarterly map for years 31-64).png-hkxu1
manual/loop/211/split2.csv
manual/loop/211/split2.csv-hkxu1
manual/loop/211/split3(annual map for years 31-64).png
manual/loop/211/split3(annual map for years 31-64).png-hkxu1
manual/loop/211/split3(latlon).png
manual/loop/211/split3(latlon).png-hkxu1
manual/loop/211/split3(lf).png
manual/loop/211/split3(lf).png-hkxu1
manual/loop/211/split3(quarterly map for years 31-64).png
manual/loop/211/split3(quarterly map for years 31-64).png-hkxu1
manual/loop/211/split3.csv
manual/loop/211/split3.csv-hkxu1
manual/loop/212/Record.csv
manual/loop/212/Record.csv-hkxu1
manual/loop/212/improvement-split1.csv
manual/loop/212/improvement-split1.csv-hkxu1
manual/loop/212/improvement-split2.csv
manual/loop/212/improvement-split2.csv-hkxu1
manual/loop/212/improvement-split3.csv
manual/loop/212/improvement-split3.csv-hkxu1
manual/loop/212/split1(annual maps for years 31-64).png
manual/loop/212/split1(annual maps for years 31-64).png-hkxu1
manual/loop/212/split1(latlon).png
manual/loop/212/split1(latlon).png-hkxu1
manual/loop/212/split1(lf).png
manual/loop/212/split1(lf).png-hkxu1
manual/loop/212/split1(quarterly maps for years 31-64).png
manual/loop/212/split1(quarterly maps for years 31-64).png-hkxu1
manual/loop/212/split1.csv
manual/loop/212/split1.csv-hkxu1
manual/loop/212/split2(annual map for years 31-64).png
manual/loop/212/split2(annual map for years 31-64).png-hkxu1
manual/loop/212/split2(latlon).png
manual/loop/212/split2(latlon).png-hkxu1
manual/loop/212/split2(lf).png
manual/loop/212/split2(lf).png-hkxu1
manual/loop/212/split2(quarterly map for years 31-64).png
manual/loop/212/split2(quarterly map for years 31-64).png-hkxu1
manual/loop/212/split2.csv
manual/loop/212/split2.csv-hkxu1
manual/loop/212/split3(annual map for years 31-64).png
manual/loop/212/split3(annual map for years 31-64).png-hkxu1
manual/loop/212/split3(latlon).png
manual/loop/212/split3(latlon).png-hkxu1
manual/loop/212/split3(lf).png
manual/loop/212/split3(lf).png-hkxu1
manual/loop/212/split3(quarterly map for years 31-64).png
manual/loop/212/split3(quarterly map for years 31-64).png-hkxu1
manual/loop/212/split3.csv
manual/loop/212/split3.csv-hkxu1
manual/loop/221/Record.csv
manual/loop/221/Record.csv-hkxu1
manual/loop/221/improvement-split1.csv
manual/loop/221/improvement-split1.csv-hkxu1
manual/loop/221/improvement-split2.csv
manual/loop/221/improvement-split2.csv-hkxu1
manual/loop/221/improvement-split3.csv
manual/loop/221/improvement-split3.csv-hkxu1
manual/loop/221/split1(annual maps for years 31-64).png
manual/loop/221/split1(annual maps for years 31-64).png-hkxu1
manual/loop/221/split1(latlon).png
manual/loop/221/split1(latlon).png-hkxu1
manual/loop/221/split1(lf).png
manual/loop/221/split1(lf).png-hkxu1
manual/loop/221/split1(quarterly maps for years 31-64).png
manual/loop/221/split1(quarterly maps for years 31-64).png-hkxu1
manual/loop/221/split1.csv
manual/loop/221/split1.csv-hkxu1
manual/loop/221/split2(annual map for years 31-64).png
manual/loop/221/split2(annual map for years 31-64).png-hkxu1
manual/loop/221/split2(latlon).png
manual/loop/221/split2(latlon).png-hkxu1
manual/loop/221/split2(lf).png
manual/loop/221/split2(lf).png-hkxu1
manual/loop/221/split2(quarterly map for years 31-64).png
manual/loop/221/split2(quarterly map for years 31-64).png-hkxu1
manual/loop/221/split2.csv
manual/loop/221/split2.csv-hkxu1
manual/loop/221/split3(annual map for years 31-64).png
manual/loop/221/split3(annual map for years 31-64).png-hkxu1
manual/loop/221/split3(latlon).png
manual/loop/221/split3(latlon).png-hkxu1
manual/loop/221/split3(lf).png
manual/loop/221/split3(lf).png-hkxu1
manual/loop/221/split3(quarterly map for years 31-64).png
manual/loop/221/split3(quarterly map for years 31-64).png-hkxu1
manual/loop/221/split3.csv
manual/loop/221/split3.csv-hkxu1
manual/loop/222/Record.csv
manual/loop/222/Record.csv-hkxu1
manual/loop/222/improvement-split1.csv
manual/loop/222/improvement-split1.csv-hkxu1
manual/loop/222/improvement-split2.csv
manual/loop/222/improvement-split2.csv-hkxu1
manual/loop/222/improvement-split3.csv
manual/loop/222/improvement-split3.csv-hkxu1
manual/loop/222/split1(annual maps for years 31-64).png
manual/loop/222/split1(annual maps for years 31-64).png-hkxu1
manual/loop/222/split1(latlon).png
manual/loop/222/split1(latlon).png-hkxu1
manual/loop/222/split1(lf).png
manual/loop/222/split1(lf).png-hkxu1
manual/loop/222/split1(quarterly maps for years 31-64).png
manual/loop/222/split1(quarterly maps for years 31-64).png-hkxu1
manual/loop/222/split1.csv
manual/loop/222/split1.csv-hkxu1
manual/loop/222/split2(annual map for years 31-64).png
manual/loop/222/split2(annual map for years 31-64).png-hkxu1
manual/loop/222/split2(latlon).png
manual/loop/222/split2(latlon).png-hkxu1
manual/loop/222/split2(lf).png
manual/loop/222/split2(lf).png-hkxu1
manual/loop/222/split2(quarterly map for years 31-64).png
manual/loop/222/split2(quarterly map for years 31-64).png-hkxu1
manual/loop/222/split2.csv
manual/loop/222/split2.csv-hkxu1
manual/loop/222/split3(annual map for years 31-64).png
manual/loop/222/split3(annual map for years 31-64).png-hkxu1
manual/loop/222/split3(latlon).png
manual/loop/222/split3(latlon).png-hkxu1
manual/loop/222/split3(lf).png
manual/loop/222/split3(lf).png-hkxu1
manual/loop/222/split3(quarterly map for years 31-64).png
manual/loop/222/split3(quarterly map for years 31-64).png-hkxu1
manual/loop/222/split3.csv
manual/loop/222/split3.csv-hkxu1
manual/loop/loop.csv
manual/references.bib
manual/test/annual maps.png
manual/test/split(lf).png
