API for HimesGroup/qmtools
Quantitative Metabolomics Data Processing Tools
| Global functions | |
|---|---|
| .arrange_plots | Source code |
| .auto_scale | Source code |
| .biplot | Source code |
| .format_padding | Source code |
| .get_loading_scalers | Source code |
| .get_quotients | Source code |
| .get_scale_factors | Source code |
| .gg_empty | Source code |
| .groupCorr | Source code |
| .groupRT | Source code |
| .hide_attributes | Source code |
| .imputeIntensity | Source code |
| .impute_knn_euclidean | Source code |
| .impute_knn_gower | Source code |
| .impute_mixed | Source code |
| .level_scale | Source code |
| .na_barplot | Source code |
| .normalizeIntensity | Source code |
| .normalize_cyclicloess | Source code |
| .pareto_scale | Source code |
| .pca_nipals | Source code |
| .pca_svd | Source code |
| .range_scale | Source code |
| .reduceFeatures | Source code |
| .relabel | Source code |
| .removeBlankRatio | Source code |
| .removeFeatures | Source code |
| .removeICC | Source code |
| .removeMiss | Source code |
| .removeRSD | Source code |
| .replace_null | Source code |
| .scale_recover | Source code |
| .scoreplot | Source code |
| .vast_scale | Source code |
| .verify_package | Source code |
| `%||%` | Source code |
| clusterFeatures | Man page Source code |
| compareSamples | Man page Source code |
| faahko_se | Man page |
| imputeIntensity | Man page |
| imputeIntensity,ANY-method | Man page |
| imputeIntensity,SummarizedExperiment-method | Man page |
| imputeKNN | Man page Source code |
| normalizeIntensity | Man page |
| normalizeIntensity,ANY-method | Man page |
| normalizeIntensity,SummarizedExperiment-method | Man page |
| normalizePQN | Man page Source code |
| plotBox | Man page Source code |
| plotCorr | Man page Source code |
| plotMiss | Man page Source code |
| plotRTgroup | Man page Source code |
| plotReduced | Man page Source code |
| print.reduced.pca | Source code |
| print.reduced.plsda | Source code |
| print.reduced.tsne | Source code |
| qmtools | Man page |
| qmtools-package | Man page |
| reduceFeatures | Man page |
| reduceFeatures,ANY-method | Man page |
| reduceFeatures,SummarizedExperiment-method | Man page |
| reducePCA | Man page Source code |
| reducePLSDA | Man page Source code |
| reduceTSNE | Man page Source code |
| removeBlankRatio | Man page Source code |
| removeFeatures | Man page |
| removeFeatures,ANY-method | Man page |
| removeFeatures,SummarizedExperiment-method | Man page |
| removeICC | Man page Source code |
| removeMiss | Man page Source code |
| removeRSD | Man page Source code |
| scaleCols | Man page Source code |
| scaleRows | Man page Source code |
| summary.reduced.pca | Source code |
| summary.reduced.plsda | Source code |
| summary.reduced.tsne | Source code |
