Files in IFB-ElixirFr/PIPprofileR
PIPprofileR
.Rbuildignore
.github/workflows/docker-image.yml
.gitignore
DESCRIPTION
Dockerfile
LICENSE
NAMESPACE
PIPprofileR.Rproj
R/shiny_application.R
README.md
inst/application/R_scripts/align_n_to_one.R
inst/application/dataExample/GCF_009858895.2_ASM985889v3_genomic.gff
inst/application/dataExample/error.fasta
inst/application/dataExample/error.gff
inst/application/dataExample/genomes_around-CoV-2.Rdata
inst/application/dataExample/genomes_around-CoV-2.fasta
inst/application/dataExample/spike_proteins_around-CoV-2.Rdata
inst/application/dataExample/spike_proteins_around-CoV-2.fasta
inst/application/panels/annotInput.R
inst/application/panels/dataInput.R
inst/application/panels/server/about_server.R
inst/application/panels/server/alignmentTabItem_server.R
inst/application/panels/server/annotationTabItem_server.R
inst/application/panels/server/graphic_server.R
inst/application/panels/server/home_server.R
inst/application/panels/server/resume_server.R
inst/application/panels/server/sequenceFilters_server.R
inst/application/panels/server/sideBar_server.R
inst/application/panels/ui/about_ui.R
inst/application/panels/ui/alignmentTabItem_ui.R
inst/application/panels/ui/annotationTabItem_ui.R
inst/application/panels/ui/graphic_ui.R
inst/application/panels/ui/helpPage_ui.R
inst/application/panels/ui/home_ui.R
inst/application/panels/ui/resume_ui.R
inst/application/panels/ui/sequenceFilters_ui.R
inst/application/report.Rmd
inst/application/rmarkdown/bottom.html
inst/application/rmarkdown/header.html
inst/application/server.R
inst/application/ui.R
inst/application/wiki/annotation/explore.png
inst/application/wiki/annotation/import.png
inst/application/wiki/annotation/importError.png
inst/application/wiki/annotation/importPreview.png
inst/application/www/css/style.css
inst/application/www/img/HC.png
inst/application/www/img/JVH.jpg
inst/application/www/img/TD.jpg
inst/application/www/img/logo.png
inst/application/www/img/logo.svg
inst/application/www/tmp/.gitkeep
inst/application/www/tmp/20201116_170550/genomeStat.tsv
installation/INSTALLATION_LINUX.sh
installation/INSTALLATION_MAC.sh
installation/INSTALLATION_WINDOWS.bat
man/shiny_application.Rd
shinyProxy/Dockerfile
shinyProxy/README.md
shinyProxy/application.yml
shinyProxy/img/monitoring_barplot_11-17-20.png
shinyProxy/img/monitoring_profile_11-17-20.png
shinyProxy/monitoring.R
shinyProxy/monitoring.sh
