Man pages for IMRpelagic/bifrost
Capelin assessment
| bifrost-package | bifrost: Capelin assessment |
| calcSSB | Calculate SSB from fit (all ages) |
| cap | Capelin table |
| captool | Function for running CAPTOOL projection |
| captoolSim | Captool simulations |
| catch | Catch data for capelin |
| consumptionData | Consumption data list: consumptionData |
| createMaturityData | Title |
| createMaturityParameters | Set up parameter list for maturity |
| estimateConsumption | Function for estimating consumption model |
| estimateMaturity | Function for estimating maturity |
| grid.search.catch | Function for setting catch, when zero catch gives prediction... |
| maturing | Function for calculating maturity from parameter estimates |
| maturityInitialParameters | Initial maturity parameters for capelin example |
| plot.captoolSim | Plot captool projection (1Oct - 1Jan) |
| plot.consumption | Plot consumption |
| plot.maturity | Plot maturity for all year classes |
| plot.maturitybyyears | Plot maturity by years |
| plotting_validation | Plotting output from captool |
| print.consumption | Print consumption object |
| print.maturity | Print maturity object |
| print.summary.consumption | Print summary of consumption |
| print.summary.maturity | Print summary of maturity |
| q05ofcatch | Function for calculating squared distance between 5... |
| runFullSim | Run full simulation from 1.October - 1.April |
| runMaturityYearByYear | Function for running maturity estimations year by year |
| summary.consumption | Summary of estimation of Consumption |
| summary.maturity | Summary of estimation of Maturity |
| updateMaturityData | Update maturity data with new Nl object |
