ISARICDataPlatform/CovidClinicalDataProcessor
Data Import and Processing for ISARIC COVID-19 Hospital Data

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Vignettes
Functions
210
Source code
11
Man pages
51
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ISARICDataPlatform/CovidClinicalDataProcessor: Data Import and Processing for ISARIC COVID-19 Hospital Data
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API

API for ISARICDataPlatform/CovidClinicalDataProcessor
Data Import and Processing for ISARIC COVID-19 Hospital Data

Global functions
admission.symptoms Man page
admission.to.icu.prep Man page Source code
age.pyramid.prep Man page Source code Source code
cleaning.unplosible.dates Source code
comorbidity.prep Man page Source code Source code
comorbidity.prevalence.prep Man page Source code Source code
comorbidity.upset.prep Man page Source code Source code
data.preprocessing Source code
date_pull Man page
epiweek.year Source code
exclud.sympt.comorb.tret Source code
extract.age.boundaries Source code
extract.age.boundaries.2 Source code Source code
func_plot_comorbid_asthma Man page Source code Source code
func_plot_comorbid_dementia Source code Source code
func_plot_comorbid_diabetes Source code Source code
func_plot_comorbid_hypertension Source code Source code
func_plot_comorbid_malignant_neoplasm Source code Source code
func_plot_comorbid_obesity Source code Source code
func_plot_comorbid_smoking Source code Source code
func_plot_lab_alt Source code Source code
func_plot_lab_aptt Source code Source code
func_plot_lab_ast Source code Source code
func_plot_lab_bili Source code Source code
func_plot_lab_crp Man page Source code Source code Source code Source code
func_plot_lab_lym Source code Source code
func_plot_lab_neut Source code Source code
func_plot_lab_pt Source code Source code
func_plot_lab_urean Source code Source code
func_plot_symptoms_abdominal_pain Source code Source code
func_plot_symptoms_altered_consciousness_confusion Source code Source code
func_plot_symptoms_constitutional Source code Source code
func_plot_symptoms_cough Source code Source code
func_plot_symptoms_cough_fever Source code Source code
func_plot_symptoms_cought_fever_shortness_of_breath Source code Source code
func_plot_symptoms_diarrhoea Source code Source code
func_plot_symptoms_history_of_fever Man page Source code Source code
func_plot_symptoms_shortness_of_breath Source code Source code
func_plot_symptoms_upper_respiratory_tract_symptoms Source code Source code
func_plot_symptoms_vomiting_nausea Source code Source code
func_plots_vs_hr Source code Source code
func_plots_vs_oxysat Source code Source code
func_plots_vs_oxysat_therapy Source code Source code
func_plots_vs_resp Man page Source code Source code
func_plots_vs_sysbp Source code Source code
func_plots_vs_temp Source code Source code
icu.treatment.use.proportion.prep Man page Source code Source code
import.demographic.data Man page Source code Source code
import.microb.data Man page Source code Source code
import.symptom.and.comorbidity.data Man page Source code Source code
key.times.prep Man page Source code Source code
length.of.stay.age.prep Man page Source code
length.of.stay.icu.prep Man page Source code Source code
length.of.stay.sex.prep Man page Source code
month.year.mapper Source code
outcome.admission.date.prep Man page Source code Source code
outcome.age.sex.prep Man page Source code Source code
patient.by.case.def.prep Man page Source code Source code
patient.by.country.map.prep Man page Source code Source code
patient.by.country.prep Man page Source code Source code
patient.characteristic.prep Man page Source code Source code
patient.site.time.map.prep Man page Source code Source code
prettify.age.labels Source code
process.ICU.data Man page Source code Source code
process.IMV.NIV.data Man page Source code
process.all.data Man page Source code
process.common.treatment.data Man page Source code Source code
process.comorbidity.data Man page Source code Source code
process.laboratory.data Man page Source code Source code
process.outcome.data Man page Source code Source code
process.pregnancy.data Man page Source code Source code
process.symptom.data Man page Source code Source code
process.treatment.data Man page Source code Source code
process.treatment.icu.data Man page Source code
process.vital.sign.data Man page Source code Source code
randomization Man page Source code
shared.data.import Source code
status.by.time.after.admission.prep Man page Source code
summary.input.overall.prep Man page Source code Source code
summary.input.prep Man page Source code Source code
symptom.heatmap Man page Source code Source code
symptom.prevalence.prep Man page Source code Source code
symptom.upset.prep Man page Source code Source code
symptoms.prep Man page Source code Source code
synthesise Man page Source code
treatment.icu.upset.prep Man page Source code Source code
treatment.upset.prep Man page Source code Source code
treatment.use.proportion.prep Man page Source code Source code
treatments.prep Man page Source code Source code
ISARICDataPlatform/CovidClinicalDataProcessor documentation built on March 22, 2022, 7:51 p.m.

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