API for IsamBenS/3CAnalysisTool
AnalysisTool
| Global functions | |
|---|---|
| AnalysisTool.run | Man page Source code |
| FPH.annotate.clusters.to.fcs | Source code |
| FPH.compute.F.G.matrix | Source code |
| FPH.get.dim.names | Source code |
| FPH.get.file.clusters | Source code |
| FPH.get.file.name | Source code |
| FPH.get.labels.from.mapping.file | Source code |
| FPH.get.prec.rec.matrices | Source code |
| FPH.get.purity.matrix | Source code |
| FPH.link.labels.to.populations | Source code |
| FPH.load.folder | Source code |
| FPH.map.test.to.ref | Source code |
| FPH.retrieve.clusters.data.from.file | Source code |
| FPH.retrieve.scores.data.from.file | Source code |
| add.keyword.to.fcs | Source code |
| benchmark.method | Source code |
| calculate.F.beta.coef | Source code |
| calculate.FG.fiability.coef | Source code |
| calculate.G.coef | Source code |
| calculate.efficiency.coef | Source code |
| calculate.false.positive.rate | Source code |
| calculate.parameter.influence.factor | Source code |
| calculate.precision.recall.for.clust | Source code |
| calculate.speed.factor | Source code |
| calculate.true.positive.rate | Source code |
| compute.purity.points | Source code |
| draw.F.score.barplot | Source code |
| draw.cumulated.filled.plots | Source code |
| enrich.FCS | Source code |
| extract.run.parameters | Source code |
| get.IDs.identical.main.param | Source code |
| get.IDs.identical.sub.params | Source code |
| get.available.ram | Source code |
| get.keywords.with.keypart.FCS | Source code |
| get.nmb.cores.max | Source code |
| get.ordered.table.from.runs | Source code |
| get.params.list | Source code |
| is.defined | Source code |
| keyword.exists.FCS | Source code |
| m.compensate | Source code |
| m.inv.compensate | Source code |
| m.inv.transform.asinh | Source code |
| m.inv.transform.logicle | Source code |
| m.transform.asinh | Source code |
| m.transform.logicle | Source code |
| modify.keyword.value | Source code |
| order.table.by.main.param | Source code |
| order.table.by.sub.params | Source code |
| plot.purity.by.pop | Source code |
| plot.selected.clusters | Source code |
| read.exec.time | Source code |
| save.exec.time | Source code |
| write.FCS.CIPHE | Source code |
