API for JBrownBiostat/Dino
Normalization of Single-Cell mRNA Sequencing Data
| Global functions | |
|---|---|
| Dino | Man page Source code |
| Dino_SCE | Man page Source code |
| SeuratFromDino | Man page Source code |
| alphaLine_func | Source code |
| alpha_func | Source code |
| betaUpdate2_func | Source code |
| betaUpdate_func | Source code |
| calcDepthRep | Source code |
| calcDev | Source code |
| calcSlope | Source code |
| calcStep_func | Source code |
| checkCounts | Source code |
| checkMinNZ | Source code |
| checkNCores | Source code |
| checkNSubCell | Source code |
| checkNSubGene | Source code |
| checkPrecDepth | Source code |
| checkRetM | Source code |
| checkSlope | Source code |
| check_DinoIn | Source code |
| convexDev_func | Source code |
| devInit_func | Source code |
| dinoResamp_func | Source code |
| emParCheck_func | Source code |
| emParInit_func | Source code |
| estDepth_func | Source code |
| estLowerCDF_func | Source code |
| estSlope_func | Source code |
| fitEM_func | Source code |
| gBeta2_func | Source code |
| gBeta_func | Source code |
| gGamma2_func | Source code |
| gGamma_func | Source code |
| gTildeUpdate_func | Source code |
| gTilde_func | Source code |
| gamUpdate2_func | Source code |
| gamUpdate_func | Source code |
| initEM_func | Source code |
| lLikFull_func | Source code |
| lLikUpdate_func | Source code |
| lLik_func | Source code |
| lpMatUpdate_func | Source code |
| lpMat_func | Source code |
| multimodalDat | Man page |
| parGradUpdate_func | Source code |
| parGrad_func | Source code |
| parListUpdate_func | Source code |
| parPoisSlope | Source code |
| parResampCounts | Source code |
| parUpdate_func | Source code |
| pbmcSmall | Man page |
| poisSlope | Source code |
| posteriorSample_func | Source code |
| resampCounts | Source code |
| resetS_func | Source code |
| rqsSample_func | Source code |
| setPar | Source code |
| splitGenes | Source code |
| takeEMStep_func | Source code |
| unimodalDat | Man page |
| zoom_func | Source code |
