Files in JTT94/mcchangepoints
.gitignore
DESCRIPTION
NAMESPACE
R/HMM.R
R/JSD.R
R/PELT.R
R/dirichlet_bayesian_model.R
R/fit_mle_matrices.R
R/hierarchical_cluster.R
R/markov_chain_helpers.R
R/optimal_partitioning.R
README.md
mcchangepoints.Rproj
presentation/5000_DNA.png
presentation/5000_DNA_with_arrow.png
presentation/Bayesian_Change_Point_Detection.pdf
presentation/DNA_seg.png
presentation/DNA_segments.pdf
presentation/DNA_segments_count_2.pdf
presentation/Grid_Merge.pdf
presentation/MC.pdf
presentation/PELTBIC_3.png
presentation/PELT_limi.png
presentation/bibliography.bib
presentation/binary_segmentation_alg.pdf
presentation/changepoints_ana.log
presentation/changepoints_ana.pdf
presentation/changepoints_ana.synctex.gz
presentation/comp_hor.png
presentation/fig1.pdf
presentation/fig2.pdf
presentation/fig3.pdf
presentation/main.pdf
presentation/main.tex
presentation/runtime.png
reports/Change_Points.pdf
reports/pres.pdf
scripts/HMM/HMM_testing.R
scripts/Jensed-Shannon/full_chromosome.R
scripts/Jensed-Shannon/parallel_time_study.R
scripts/Jensed-Shannon/plots_for_DNA.R
scripts/Jensed-Shannon/simple_trial.R
scripts/Jensed-Shannon/time_complexity.png
scripts/Jensed-Shannon/trial_genomic_data.R
scripts/bayesian_model/bayesian_mh_scheme.R
scripts/bayesian_model/gibbs_latent_state_scheme.R
test_data/generate_data.R
tests/testthat.R
