Files in JamesOpz/splitRtools
Processes zUMIs split-seq data for downstream analysis
.Rbuildignore
.Rhistory
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/general_utils.R
R/plotting_utils.R
R/run_split_pipe.R
R/sce_merge_utils.R
R/sce_utils.R
README.Rmd
README.md
data/3_umi_waterfall.png
data/barcodes_v1.csv
data/barcodes_v2.csv
data/cell_abundance_barplot.png
data/cell_metadata.xlsx
data/rt_barcoding_layout.png
data/rt_umi_layout.png
man/filter_split_sce.Rd
man/gen_split_sce.Rd
man/generate_barcoding_heatmaps.Rd
man/get_read_count.Rd
man/get_seq_run_info.Rd
man/label_sce_data.Rd
man/merge_sce_sublibs.Rd
man/merge_sparse.Rd
man/raw_bc_hist.Rd
man/run_split_pipe.Rd
man/sce_merge_stats.Rd
man/split_stats_downsample_rds.Rd
man/split_stats_output.Rd
man/write_sce_split_lab_filt_stats.Rd
splitRtools.Rproj
tests/testthat.R
