API for JiyuanHu/massMap
massMap: a two-stage microbial association mapping framework with advanced FDR control
| Global functions | |
|---|---|
| .OTU.cal | Source code |
| Hirarchical.two.stage | Source code |
| OTU.level.anal.func | Source code |
| OTU.level.anal.func.Surv | Source code |
| OTU.level.anal.func4clusters | Source code |
| QMiRKAT | Source code |
| QMiRKAT.perm | Source code |
| QMiRKATk.cal | Source code |
| TSPUgamma | Source code |
| all.BH.methods | Source code |
| calculate.T.OMiRKAT | Source code |
| calculate.T.aSPU | Source code |
| calculate.pval.OMiAT | Source code |
| calculate.pval.others | Source code |
| cluster.statistical.test.func | Source code |
| cluster.statistical.test.func.Surv | Source code |
| distance.cal | Source code |
| get.two.stage.info | Source code |
| massMap | Man page Source code |
| massMap-package | Man page |
| massMap.Surv | Source code |
| massMap.glm | Source code |
| minP.MiRKAT | Source code |
| minP.MiRKAT.perm | Source code |
| minP.OMiAT | Source code |
| minP.SPUgamma.all | Source code |
| organize.res.screening | Source code |
| phy | Man page |
| prepare.data | Source code |
| preprocess4tax | Source code |
| pval.OTU.cal | Source code |
| relative.abundance | Source code |
| reorganize.pval | Source code |
| residual.perm | Source code |
| selected.subset.testing | Source code |
| simulate.clusters.info | Source code |
| traditional.BH | Source code |
