Man pages for JohannesNE/waveformtools
Tools for waveform analysis in my PhD project
| abp | Simple 125 hz Arterial blood pressure waveform |
| add_time_since_event | Add indexing of signal time in relation to some recurring... |
| add_volume_signal | Generate volume waveform from flow |
| anonymize_record_time | Anonymize record time |
| as_seconds | Return seconds since epoch |
| calculate_classic_ppv | Calculate PPV using simple algorithm |
| dygraph_c | Combine Dygraphs |
| dygraph_events | Add events to dygraph |
| dygraph_gam | Plot model predictions and observations using Dygraphs |
| dygraph_signal | Plot a signal with dygraphs |
| ecg_noisy | Noisy ECG (500 hz) |
| filter_signal | Filter signal, defaluts to 2nd order Butterworth low pass... |
| find_abp_beats | Create DataFrame of arterial pressure waveform annotations. |
| find_peaks | Peak detection algorithm from... |
| find_PP_minmax | Find respiratory min and max in pulse pressure time series |
| find_resp_len_from_PP | Find resp length from Pulse Pressure data using GAM |
| fix_repeating_values | Remove repeating instances of the same sample |
| fix_time_shifts | Fix Time shifts in vital waveforms |
| flag_beats | Flag Abnormal Beats |
| format_hms | Format as HMS with 3 decimals |
| gen_annotation_index | Add indexing of signal time in relation to some recurring... |
| gen_device_settings_annotation | Generate simple data frame of device settings |
| gen_r_peaks_df | Find R peaks in ECG |
| geom_annotation | Geom to add point annotations to plot |
| get_gam_ppv | Get PPV from GAM model |
| get_PP_gam_predictions | Create data frame of data, fit and residuals of pulse... |
| is_extra_systole | Find extra systoles from beat times |
| join_nearest | Join Nearest Left join two data frames, by aligning the... |
| plot_PP_gam | Plot pulse pressure GAM smooths and partial residuals |
| plot_signal | Plot a signal |
| PP_gam | mgcv GAM of pulse pressures |
| PP_gam_analysis | Analyse Pulse Pressure data using a GAM Respiratory cycle... |
| read_vital | Read Vital |
| read_vital_csv | Load csv files created by custom python module. |
| read_vital_header | Read Header CSV (tracks.csv) from parse_vital |
| read_vscapture | Load all csv files created by VSCapture DrgVent. Converts... |
| read_vscapture_rt | Load csv files with realtime data created by VSCapture... |
| read_vscapture_rt_csv | Load csv file with realtime data created by VSCapture DrgVent |
| read_vscapture_slow | Load all csv files with slow data created by VSCapture... |
| read_vscapture_slow_csv | Load csv files with slow data created by VSCapture DrgVent |
| record_time_to_hms | Convert record datetime to HMS |
| sample_record | Complete recording (old format) |
| sample_record2 | Complete recording (new format) |
| sample_vscapture_rt | Waveform data from VS capture |
| seconds_since_start | Return seconds since start of time vector |
| shift_record_time | Shift record time |
| splitAt | Split by index |
| subset_record | Subset nested signals |
