| bc2st | Internal QFA function. Do not call directly |
| bctimes | Internal QFA function. Do not call directly |
| colony.fit2 | Internal QFA function called by qfa.fit2. Do not call... |
| colony.info | Internal QFA function. Do not call directly |
| colonyzer.read | Read raw cell density timecourse data from Colonyzer output... |
| data.fit2 | Internal QFA function called by qfa.fit2. Do not call... |
| de.fit2 | Internal QFA function called by qfa.fit2. Do not call... |
| dtl | Internal QFA function. Do not call directly. |
| GC2QFA | Converting plate reader growth curve output for QFA usage |
| gen_logistic_maxslp | Internal QFA function. Do not call directly |
| Glogist | Internal QFA function. Do not call directly. |
| GlogistDer | Internal QFA function. Do not call directly. |
| Gmprtz | Internal QFA function. Do not call directly. |
| growthcurve2 | Internal QFA function called by qfa.fit2. Do not call... |
| guess2 | Internal QFA function called by qfa.fit2. Do not call... |
| hello | Hello, World! |
| loapproxfun | Internal QFA function. Do not call directly |
| logist | Internal QFA function. Do not call directly. |
| makeBoundsQFA2 | Internal QFA function called by qfa.fit2. Do not call... |
| makeFitness2 | Generate QFA fitness |
| makefits2 | Internal QFA function called by qfa.fit2. Do not call... |
| mdp | Internal QFA function. Do not call directly. |
| mdr | Internal QFA function. Do not call directly. |
| mdrmdp | Internal QFA function. Do not call directly. |
| na2zero | Internal QFA function. Do not call directly |
| normalisePlates | Normalising culture fitness by plate |
| nozero | Internal QFA function. Do not call directly |
| numericalfitness2 | Internal QFA function. Do not call directly. |
| numerical_r2 | Internal QFA function called by qfa.fit2. Do not call... |
| orf2g | Internal QFA function. Do not call directly |
| orf2gdict | Internal QFA function. Do not call directly |
| orfun | Internal QFA function. Do not call directly |
| posmake | Internal QFA function. Do not call directly |
| qfa.AggregateCurves | Plot all data measurement points including model curves... |
| qfa_check_packages | Internal QFA function. Do not call directly. |
| qfa.epi | Finds genetic interaction strengths and p-values |
| qfa.epiplot | Makes an epistasis plot from the full results of qfa.epi |
| qfa.fit2 | Growth curve modelling |
| qfaFitnessPlot | Boxplots displying specified fitness measurements, colored... |
| qfa.normalize | Function to normalize QFA data |
| qfa.plot2 | Creating plots of growth curves including models for QFA... |
| qfa.testdata | A screen of three Staphylococcus aureus strains arranged in a... |
| sterr | Internal QFA function. Do not call directly |
| summarise | Internal QFA function. Do not call directly |
| sumsq2 | Internal QFA function called by qfa.fit2. Do not call... |
| tconv | Internal QFA function. Do not call directly. |
| trep | Internal QFA function. Do not call directly. |
| varposget | Internal QFA function. Do not call directly |
