Files in KopfLab/isocyclr
Model isotope fractionation in biogeochemical cycles and pathways
.gitignore
.travis.yml
DESCRIPTION
LICENSE
Makefile
NAMESPACE
R/calculations.R
R/component.R
R/isotope.R
R/model.R
R/notes.R
R/package.R
R/parameters.R
R/plotting.R
R/reaction.R
R/steady_state.R
R/system.R
R/validation.R
README.md
inst/doc/.gitignore
inst/doc/rxn_diagram-1.png
inst/doc/steady_state-1.png
inst/doc/steady_state_branching-1.png
inst/doc/time_course-1.png
inst/doc/time_course_event-1.png
man/add_component.Rd
man/add_component_.Rd
man/add_custom_reaction.Rd
man/add_isotope.Rd
man/add_reaction_.Rd
man/add_standard_reaction.Rd
man/check_model.Rd
man/default_abscissa.Rd
man/default_rxn_name.Rd
man/dir_flux.Rd
man/expand_data_frame.Rd
man/expand_parameters.Rd
man/fractionate.Rd
man/generate_reaction_diagram.Rd
man/get_component_matrix.Rd
man/get_ode_expression.Rd
man/get_ode_function.Rd
man/get_ode_matrix.Rd
man/get_reaction_component_matrix.Rd
man/get_reaction_isotope_matrix.Rd
man/get_reaction_matrix.Rd
man/isocyclr.Rd
man/isopath.Rd
man/merge_isopaths.Rd
man/mutate_parameters.Rd
man/parse_reaction_component.Rd
man/parse_reaction_equation.Rd
man/run_model.Rd
man/run_steady_state.Rd
man/set_parameters.Rd
tests/test-all.R
tests/testthat/test-01.R
tests/testthat/test-02.R
tests/testthat/test-03.R
vignettes/examples.Rmd
vignettes/testing.Rmd
