Man pages for LCBC-UiO/MOAS
MOAS convenience functions
| add_lcbc_logo | Add LCBC logo to plot |
| anonymize_moas | Anonymise the MOAS |
| baseCols | MOAS base columns |
| check_tp | Check subject timepoint |
| clean_DF | Cleans data from SPSS into a data.frame |
| data | MOAS mock example data |
| dbs_add | Add DBS data to data frame |
| dbs_get | Get DBS information from a file |
| deselect_sensitive | Deselect sensitive columns |
| docs_paradigm_order_chapter | Order the chapters of the Paradigm documentation |
| docs_paradigm_page | Create new chapter for the Paradigm documentation |
| docs_project_order_chapter | Order the chapters of the Paradigm documentation |
| docs_project_page | Create new chapter for the Project documentation |
| epigen_add | Add epigenetic data to MOAS like data |
| epigen_get | Get epigenetic data |
| filter_site | Utility function for reducing double/triple scans to a single... |
| filter_trainingexposed | Filter out when a participant has trained |
| fix_dups | NA replacement in duplicated columns |
| fs_lmm | Create a data.frame that is ready for use in Freesufers... |
| inbody_add | Add InBody data to data |
| inbody_add_all | Add all InBody data from folder to data |
| inbody_get | Get InBody data |
| inbody_get_all | Get all Inbody data from folder |
| inbody_read | Read InBody data |
| launch_check_tp | Launch shiny app to find subject timepoint |
| launch_LCBCshiny | Function to launch the LCBC shiny data explorer |
| lcbc_cols | Function to extract lcbc colors as hex codes |
| lcbc_logo_grob | LCBC logo graphics object |
| lcbc_pal | Return function to interpolate a lcbc color palette |
| mutate_ages | Calculates ages based on birthdates and test/MRI dates |
| mutate_mean_date | Calculate or infer the mean data for data collected |
| mutate_sensitive | Alter sensitive columns to make them less sensitive |
| na_col_rm | Utility function to remove columns with no data |
| pgs_add | Add PGS data to the MOAS |
| pgs_add_all | Add all PGS data to the MOAS |
| pgs_add_single | Add single PGS data to the MOAS |
| pgs_get | Read in and sort PGS data |
| pgs_get_all | Get all PGS's |
| pgs_get_single | Read in and sort a single PGS profile |
| pgs_read | Read in a PGS file |
| project_cols | Function to extract project colors as hex codes |
| project_pal | Return function to interpolate a project color palette |
| Projects | MOAS Projects |
| scale_color_lcbc | Color scale constructor for lcbc colors |
| scale_color_proj | Color scale constructor for proj colors |
| scale_colour_lcbc | Colour scale constructor for lcbc colors |
| scale_colour_proj | Colour scale constructor for proj colors |
| scale_fill_lcbc | Fill scale constructor for lcbc colors |
| scale_fill_proj | Fill scale constructor for proj colors |
| select_sensitive | Select sensitive columns |
| site_keeper | Deprecated, use filter_site |
| Sites | MOAS sites |
| theme_lcbc | ggplot minimal theme for lcbc |
| theme_lcbc_dark | ggplot minimal theme for lcbc |
| theme_lcbc_dark_grid | ggplot dark theme for lcbc |
| theme_lcbc_dark_void | ggplot minimal theme for lcbc |
| theme_lcbc_grid | ggplot theme for lcbc |
| theme_lcbc_void | ggplot minimal theme for lcbc |
| tsdify | Creates TSD folder names for MRI data location, or project... |
| variables | MOAS variables |
| widen | Widen the MOAS data.frame |
