| boundingBox | Get the bounding box |
| conversion | Converting to/from pairs |
| findDistalAnchors | Find distal anchor regions |
| findOverlaps | Find overlaps between GenomicInteractions |
| GenomicInteractions | The GenomicInteractions class |
| GenomicInteractions-package | The 'GenomicInteractions' package |
| linkOverlaps | Link overlapping regions |
| pairdist | Get the linear distance for each interaction |
| swapAnchors | Swap anchor regions |
| updateObject | Update old GenomicInteractions |
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