Files in LeileiCui/ADDO
a comprehensive toolkit to detect, classify and visualise additive and non-additive Quantitative Trait Loci

ADDO-manual.pdf
ADDO_0.1.0.tar.gz
DESCRIPTION
LICENSE
NAMESPACE
R/ADDO_AddDom1_QC.r R/ADDO_AddDom2_Pvalue.r R/ADDO_AddDom3_Plot.r R/ADDO_AddDom4_IntePlot.r R/ADDO_Heterotic1_QC.r R/ADDO_Heterotic2_Pvalue.r R/ADDO_Heterotic3_Plot.r R/ADDO_Heterotic4_IntePlot.r R/plotGWAS.r R/plotRegion.r README.md
data/TEST.bed
data/TEST.bim
data/TEST.covs
data/TEST.fam
data/TEST.phe
demo/TEST_AddDom_Model.r demo/TEST_Heterotic_Model.r
gallery/1_AddDom/0_All/All_Trait1.png
gallery/1_AddDom/0_All/All_Trait2.png
gallery/1_AddDom/1_Manhattan/Manhattan_Trait1.png
gallery/1_AddDom/1_Manhattan/Manhattan_Trait2.png
gallery/1_AddDom/2_QQ_Plot/1_Whole/QQplot_Trait1.png
gallery/1_AddDom/2_QQ_Plot/1_Whole/QQplot_Trait2.png
gallery/1_AddDom/2_QQ_Plot/2_Rmchr/QQplot_rmqtl_Trait1.png
gallery/1_AddDom/2_QQ_Plot/2_Rmchr/QQplot_rmqtl_Trait2.png
gallery/1_AddDom/3_PeakSNP_RegionMan/ManhattanRegion_Trait1.png
gallery/1_AddDom/3_PeakSNP_RegionMan/ManhattanRegion_Trait2.png
gallery/1_AddDom/4_PeakSNP_BoxPlot/Boxplot_Trait1.png
gallery/1_AddDom/4_PeakSNP_BoxPlot/Boxplot_Trait2.png
gallery/2_Heterotic/0_All/All_Trait1.png
gallery/2_Heterotic/0_All/All_Trait2.png
gallery/2_Heterotic/1_Manhattan/ManhattanFilter_Trait1.png
gallery/2_Heterotic/1_Manhattan/ManhattanFilter_Trait2.png
gallery/2_Heterotic/1_Manhattan/Manhattan_Trait1.png
gallery/2_Heterotic/1_Manhattan/Manhattan_Trait2.png
gallery/2_Heterotic/2_QQ_Plot/QQplot_Trait1.png
gallery/2_Heterotic/2_QQ_Plot/QQplot_Trait2.png
gallery/2_Heterotic/3_Contour_Plot/ContourPlot_Trait1.png
gallery/2_Heterotic/3_Contour_Plot/ContourPlot_Trait2.png
gallery/2_Heterotic/4_PeakSNP_RegionMan/ManhattanRegion_Trait1.png
gallery/2_Heterotic/4_PeakSNP_RegionMan/ManhattanRegion_Trait2.png
gallery/2_Heterotic/5_PeakSNP_BoxPlot/Boxplot_Trait1.png
gallery/2_Heterotic/5_PeakSNP_BoxPlot/Boxplot_Trait2.png
man/ADDO_AddDom1_QC.Rd man/ADDO_AddDom2_Pvalue.Rd man/ADDO_AddDom3_Plot.Rd man/ADDO_AddDom4_IntePlot.Rd man/ADDO_Heterotic1_QC.Rd man/ADDO_Heterotic2_Pvalue.Rd man/ADDO_Heterotic3_Plot.Rd man/ADDO_Heterotic4_IntePlot.Rd man/plotGWAS.Rd man/plotRegion.Rd
LeileiCui/ADDO documentation built on July 25, 2020, 1:51 a.m.