API for LeoStafu/metaDAF
Metagenomics tools for detecting Differentially Abundant Features
| Global functions | |
|---|---|
| HMP_2012_metadata | Man page |
| HMP_2012_table_count | Man page |
| QinJ_2012_metadata | Man page |
| QinJ_2012_table_count | Man page |
| ZellerG_2014_metadata | Man page |
| ZellerG_2014_table_count | Man page |
| boxplot_AUC | Man page |
| boxplot_rank | Man page Source code |
| build_DAF_data | Man page Source code |
| curve_plot | Man page Source code |
| generate_curve_data | Man page Source code |
| generate_differences | Man page Source code |
| generate_repeated_DAF_data | Man page |
| preprocess_DAF_data | Man page Source code |
| process_ALDEx2 | Man page Source code |
| process_DESeq2 | Man page Source code |
| process_RAIDA | Man page Source code |
| process_ZIBseq | Man page Source code |
| process_edgeR | Man page Source code |
| process_mbzinb | Man page Source code |
| process_metagenomeSeq | Man page Source code |
| process_voom | Man page Source code |
| process_wilcox | Man page Source code |
| rank_features | Man page Source code |
| run_DAF_analysis | Man page Source code |
| run_DAF_compare | Source code |
| run_DAF_repeat | Source code |
| run_DAF_repeat_compare | Source code |
| select_process | Man page Source code |
