Man pages for LiamDBailey/baileyetal2021
Bird populations most exposed to climate change are less sensitive to climatic variation
| align_legend | Change alignment of ggplot legend title |
| Appendix1_var01 | Simulated scenario where sensitivity and exposure are... |
| Appendix1_var02 | Simulated scenario where sensitivity and exposure are... |
| Appendix1_var03 | Simulated scenario where sensitivity and exposure are... |
| Ben_sim | Simulation to address Ben Sheldon's comments |
| Ben_sim_i | Run multiple iterations to simulate sensitivty/exposure... |
| calculate_grid_distance | Calculate distance between study sites and temperature grid... |
| climate_sensitivity_and_exposure | Output containing climwin slopes, pvalues and population... |
| confint_2levels | Calculate 95 and 99.5 CIs for a given model. |
| ECAD_locations | Lat/Long coordinates of study sites used to extract from... |
| estimate_exposure | Estimate the rate of climate change for each population. |
| estimate_sensitivity | Estimate climatic sensitivity for all data. |
| Euro_temp | Raster stack of European temperatures |
| extract_temp_data | Extract temperature data for given population. |
| format_data | Format raw nest data into the correct format for climwin... |
| gen_tableS1 | Generate data used for Supplementary Data 1 |
| geom_flat_violin | Create one sided violin plot |
| Lay_date_summary | Primary data used as the basis for all analysis |
| Metzger_PCA | Results of principal component analysis by Metzger et al.... |
| MODIS_data | MODIS Terra+Aqua Combined Land Cover product (MCD12Q1) for... |
| MODIS_translation | Data frame to convert MODIS number values into text... |
| or_operator | Operator to apply ifelse function |
| pad_number | Prepare numbers for display in tables/plots |
| Pop_info | A SpatialPointsDataFrame with location information of all... |
| Population_summary | A mean laying date for every species/population combo |
| run_climwin | Run climwin analysis on data for a single population/species... |
| run_SEM | Run SEM for a given dataset. |
| Sicily_temp_data | Data collected on site in the Sicily population from... |
| theme_ubuntu | Personal theme for making plots |
| Vlieland_temp_data_new | Data collected on Vlieland by KNMI from 01/01/1996 -... |
| Vlieland_temp_data_old | Data collected on Terschelling by KNMI from 01/01/1954 -... |
