Files in LocalEpi/LEMMA
Local Epidemic Modeling for Management & Action
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
R/CreateOutputs.R
R/CredibilityInterval.R
R/GetVaccineParams.R
R/InputsFromSpreadsheet.R
R/LEMMA-package.R
R/stanmodels.R
README.md
_pkgdown.yml
configure
configure.win
docs/404.html
docs/LICENSE-text.html
docs/articles/MI_admits.png
docs/articles/MI_deaths.png
docs/articles/MI_hosp.png
docs/articles/Michigan.html
docs/articles/Michigan_files/header-attrs-2.6/header-attrs.js
docs/articles/Michigan_files/header-attrs-2.8/header-attrs.js
docs/articles/case_study.html
docs/articles/case_study_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/case_study_files/figure-html/unnamed-chunk-7-1.png
docs/articles/case_study_files/figure-html/unnamed-chunk-8-1.png
docs/articles/faq.html
docs/articles/faq_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/faq_files/header-attrs-2.6/header-attrs.js
docs/articles/faq_files/header-attrs-2.8/header-attrs.js
docs/articles/index.html
docs/articles/variant_frac.png
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/CredibilityIntervalFromExcel.html
docs/reference/LEMMA-package.html
docs/reference/figures/MI_admits.png
docs/reference/figures/MI_deaths.png
docs/reference/figures/MI_hosp.png
docs/reference/figures/SEIRModel.png
docs/reference/figures/SEIRModelLegend.png
docs/reference/figures/doses_future.png
docs/reference/figures/doses_obs.png
docs/reference/figures/interventions.png
docs/reference/figures/model_inputs.png
docs/reference/figures/obs_data.png
docs/reference/figures/params.png
docs/reference/figures/pui.png
docs/reference/figures/sf_output.png
docs/reference/figures/sf_output_lt.png
docs/reference/figures/vaccines_dist.png
docs/reference/figures/variant_frac.png
docs/reference/figures/variants.png
docs/reference/index.html
index.md
inst/extdata/.gitignore
inst/extdata/template.xlsx
inst/include/stan_meta_header.hpp
inst/stan/LEMMA.stan
inst/stan/include/license.stan
man/CredibilityIntervalFromExcel.Rd
man/LEMMA-package.Rd
man/figures/MI_admits.png
man/figures/MI_deaths.png
man/figures/MI_hosp.png
man/figures/SEIRModel.png
man/figures/SEIRModelLegend.png
man/figures/doses_future.png
man/figures/doses_obs.png
man/figures/interventions.png
man/figures/model_inputs.png
man/figures/obs_data.png
man/figures/params.png
man/figures/pui.png
man/figures/sf_output.png
man/figures/sf_output_lt.png
man/figures/vaccines_dist.png
man/figures/variant_frac.png
man/figures/variants.png
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/stanExports_LEMMA-817309f7.o.tmp
src/stanExports_LEMMA.cc
src/stanExports_LEMMA.h
vignettes/.gitignore
vignettes/MI output.pdf
vignettes/MI output.xlsx
vignettes/MI.xlsx
vignettes/MI_double output.pdf
vignettes/MI_double output.xlsx
vignettes/MI_double.xlsx
vignettes/MI_pause output.pdf
vignettes/MI_pause output.xlsx
vignettes/MI_pause.xlsx
vignettes/MI_pause_double output.pdf
vignettes/MI_pause_double output.xlsx
vignettes/MI_pause_double.xlsx
vignettes/MI_sensitivity.csv
vignettes/Michigan.Rmd
vignettes/faq.Rmd
