Files in MANO-B/MicroSEC
Sequence Error Filter for Formalin-Fixed and Paraffin-Embedded Samples
.Rbuildignore
.github/workflows/rhub.yaml
.gitignore
CRAN-SUBMISSION
DESCRIPTION
LICENSE
LICENSE.md
MicroSEC.R
MicroSEC.Rproj
MicroSEC.def
MicroSEC_logo.png
NAMESPACE
NEWS.md
R/.DS_Store
R/data.R
R/fun_analysis.R
R/fun_hairpin_check.R
R/fun_homology.R
R/fun_load_bam.R
R/fun_load_chr_no.R
R/fun_load_genome.R
R/fun_load_mutation.R
R/fun_read_check.R
R/fun_repeat_check.R
R/fun_save.R
R/fun_setting.R
R/fun_summary.R
R/fun_zero.R
README.md
cran-comments.md
data/exampleBam.rda
data/exampleMutation.rda
data/homology_searched.rda
data/msec_analyzed.rda
data/msec_homology_searched.rda
data/msec_read_checked.rda
data/msec_summarized.rda
data/mut_depth_checked.rda
inst/.DS_Store
inst/WORDLIST
inst/extdata/.DS_Store
inst/extdata/Sample_list_test.tsv
inst/extdata/mutation_list.tsv
inst/extdata/sample.bam
man/exampleBam.Rd
man/exampleMutation.Rd
man/fun_analysis.Rd
man/fun_hairpin_check.Rd
man/fun_homology.Rd
man/fun_load_bam.Rd
man/fun_load_chr_no.Rd
man/fun_load_genome.Rd
man/fun_load_mutation.Rd
man/fun_read_check.Rd
man/fun_repeat_check.Rd
man/fun_save.Rd
man/fun_setting.Rd
man/fun_summary.Rd
man/fun_zero.Rd
man/homology_searched.Rd
man/msec_analyzed.Rd
man/msec_homology_searched.Rd
man/msec_read_checked.Rd
man/msec_summarized.Rd
man/mut_depth_checked.Rd
vignettes/my-vignette.R
vignettes/my-vignette.Rmd
vignettes/my-vignette.html
