| annotation_get | Get GO annotations |
| cna_run | Run WGCNA |
| expression_reshape | Reshape data for WGCNA |
| interactions_get | Get STRING interactions |
| member_importance | Calculate member importance in a graph |
| member_similarity | Calculate pair-wise similarity in an expresison matrix |
| metadata_get | Get metadata from ExpressionSet |
| module_compare | Compare enrichment by modules |
| module_network | Make graph object of module members |
| rkip | 'rkip' package |
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