API for Mamie/scDNAmClock
Epigenetic clock on scMethyl-seq data
| Global functions | |
|---|---|
| PhenoAge | Man page Source code |
| SVT_denoise | Man page Source code |
| as_GRanges | Man page |
| as_GRanges,methCall-method | Man page |
| as_df | Man page |
| as_df,methCall-method | Man page |
| choose_k | Man page |
| color.palette | Source code |
| div_svt_complex | Source code |
| div_svt_real | Source code |
| fancy_scientific | Source code |
| filter_sites | Man page |
| filter_sites,methCall,function-method | Man page |
| join_meth_list | Man page Source code |
| map_coord | Man page |
| map_coord,methCall,character-method | Man page |
| methCall-class | Man page |
| n_row | Man page |
| n_row,methCall-method | Man page |
| plot_SURE | Source code |
| plot_coverage | Man page Source code |
| read_meth | Man page Source code |
| soft_threshold | Source code |
| sure_div_svt | Source code |
| tidy_coef | Man page Source code |
| truncate_outlier | Source code |
