Man pages for MarekSlenker/MorphoTools2
Multivariate Morphometric Analysis
| boxMTest | Box's M-test for Homogeneity of Covariance Matrices |
| boxplotCharacter | Box Plots |
| cda.calc | Canonical Discriminant Analysis |
| cdadata | Class Cdadata |
| centaurea | 25 Morphological Characters of Three Species of the... |
| characters | List Morphological Characters |
| classifdata | Class classifdata |
| classif.lda | Classificatory Discriminant Analysis |
| classif.matrix | Format the Classifdata to Summary Table |
| classifSample.lda | Classificatory Discriminant Analysis |
| clust | Hierarchical Clustering |
| cormat | Correlations of Characters |
| descrTaxon | Descriptive Statistics |
| exportRes | Export Data |
| head.morphodata | Return the First or Last Parts of an Object |
| histCharacter | Histograms of Characters |
| keepTaxon | Keep Items (Taxa, Populations, Samples, Morphological... |
| knn.select | Search for the Optimal K-nearest Neighbours |
| missingCharactersTable | Summarize Missing Data |
| missingSamplesTable | Summarize Missing Data |
| morphodata | Class morphodata |
| naMeanSubst | Replace Missing Data by Population Average |
| nmds.calc | Non-metric Multidimensional Scaling (NMDS) |
| nmdsdata | Class nmdsdata |
| pca.calc | Principal Component Analysis |
| pcadata | Class pcadata |
| pcoa.calc | Principal Coordinates Analysis (PCoA) |
| pcoadata | Class pcoadata |
| plot3Dpoints | The Default Scatterplot 3D Function |
| plotAddEllipses | Add Prediction Ellipses to a Plot |
| plotAddLabels.characters | Add Labels to a Plot |
| plotAddLabels.points | Add Labels to a Plot |
| plotAddLegend | Add Legend to a Plot |
| plotAddSpiders | Add Spiders to a Plot |
| plotBiplot | The Default Biplot Function |
| plotCharacters | Draws Character's Contribution as Arrows |
| plotPoints | The Default Scatterplot Function |
| populOTU | Population Means |
| qqnormCharacter | Quantile-Quantile Plots |
| read.morphodata | Data Input and Description |
| removeTaxon | Remove Items (Taxa, Populations, Morphological Characters)... |
| shapiroWilkTest | Shapiro-Wilk Normality Test |
| stepdisc.calc | Stepwise Discriminant Analysis |
| summary | Object Summaries |
| transformCharacter | Transformation of Character |
| viewMorphodata | Invoke a Data Viewer |
