Files in MarianSchoen/DTD

Digital Tissue Deconvolution

R/function_FISTA.R R/function_crossValidation.R R/function_cv_bucket_maker.R R/function_cv_lambda_generator.R R/function_cv_pick_mean_test.R R/function_cv_safety_checks.R R/function_cv_select_subset.R R/function_estimateC.R R/function_estimateCDirect.R R/function_estimateCNN.R R/function_eval_cor.R R/function_gPath.R R/function_generate_random_data.R R/function_gradient.R R/function_mix_many_samples.R R/function_mix_with_Jitter.R R/function_nesterovFactors.R R/function_normToCount.R R/function_norms.R R/function_plotCV.R R/function_plotConvergence.R R/function_plotTweakHist.R R/function_plot_esti_vs_true.R R/function_plot_heatmap.R R/function_sampleX.R R/function_softThresholding.R R/function_trainDeconvMod.R R/interface_cxx.R R/test_functions.R README.md man/DTD_cv_lambda_R.Rd man/DTD_cv_lambda_cxx.Rd man/DTD_cv_lambda_test_input_generic.Rd man/check_model.Rd man/cxx_estimate_c.Rd man/cxx_evaluate_model.Rd man/cxx_nnls.Rd man/descent_generalized_fista.Rd man/descent_generalized_fista_cxx.Rd man/empty_model.Rd man/estimate_c.Rd man/estimate_direct_c.Rd man/estimate_nn_c.Rd man/evaluate_cor.Rd man/generate_random_data.Rd man/ggplot_convergence.Rd man/ggplot_cv.Rd man/ggplot_ghistogram.Rd man/ggplot_gpath.Rd man/ggplot_heatmap.Rd man/ggplot_true_vs_esti.Rd man/gradient_cor_trace.Rd man/identity.Rd man/lambda_sequence.Rd man/make_buckets.Rd man/mix_samples.Rd man/mix_samples_with_jitter.Rd man/n1normed.Rd man/n2normed.Rd man/nesterov_factor.Rd man/normalize_to_count.Rd man/pick.mean.test.results.function.Rd man/positive_subspace_pmax.Rd man/sample_random_X.Rd man/select.fun.Rd man/set_model_coeff_estimation.Rd man/set_model_inversion_precision.Rd man/set_model_normfunction.Rd man/set_model_subspacefunction.Rd man/set_model_threshfunction.Rd man/soft_thresholding.Rd man/solve_fista_goertler.Rd man/test_c_type.Rd man/test_integer.Rd man/test_logical.Rd man/test_numeric.Rd man/test_string.Rd man/test_tweak_vec.Rd man/train_deconvolution_model.Rd tests/testthat.R tests/testthat/tests-unit-DTD.R vignettes/DTD_vignette.Rmd