MartinLoza/Canek: Batch Correction of Single Cell Transcriptome Data

Non-linear/linear hybrid method for batch-effect correction that uses Mutual Nearest Neighbors (MNNs) to identify similar cells between datasets. Reference: Loza M. et al. (NAR Genomics and Bioinformatics, 2020) <doi:10.1093/nargab/lqac022>.

Getting started

Package details

Maintainer
LicenseMIT + file LICENSE
Version0.2.5
URL https://martinloza.github.io/Canek/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("MartinLoza/Canek")
MartinLoza/Canek documentation built on Jan. 28, 2024, 7:11 p.m.