.Rbuildignore
          
        
          
            
            .gitattributes
          
        
          
            
            .gitignore
          
        
          
            
            DESCRIPTION
          
        
          
            
            GVTr.Rproj
          
        
          
            
            NAMESPACE
          
        
          
            
            R/BasePlot_function.R
          
        
          
            
            R/EdgeSwtich_function.R
          
        
          
            
            R/FVAXnet_function.R
          
        
          
            
            R/GVTlayout_function.R
          
        
          
            
            R/GVTplot_function.R
          
        
          
            
            R/GVTprune_function.R
          
        
          
            
            R/VACel_function.R
          
        
          
            
            R/VACmat_function.R
          
        
          
            
            R/VACnet_function.R
          
        
          
            
            R/wiot2000_data.R
          
        
          
            
            R/wiot2001_data.R
          
        
          
            
            R/wiot2002_data.R
          
        
          
            
            R/wiot2003_data.R
          
        
          
            
            R/wiot2004_data.R
          
        
          
            
            R/wiot2005_data.R
          
        
          
            
            R/wiot2006_data.R
          
        
          
            
            R/wiot2007_data.R
          
        
          
            
            R/wiot2008_data.R
          
        
          
            
            R/wiot2009_data.R
          
        
          
            
            R/wiot2010_data.R
          
        
          
            
            R/wiot2011_data.R
          
        
          
            
            R/wiot2012_data.R
          
        
          
            
            R/wiot2013_data.R
          
        
          
            
            R/wiot2014_data.R
          
        
          
            
            README.Rmd
          
        
          
            
            README.md
          
        
          
            
            README_cache/html/__packages
          
        
          
            
            README_cache/html/packagesRUN_bda9294d5804abd9452f2007dfc2e3dd.RData
          
        
          
            
            README_cache/html/packagesRUN_bda9294d5804abd9452f2007dfc2e3dd.rdb
          
        
          
            
            README_cache/html/packagesRUN_bda9294d5804abd9452f2007dfc2e3dd.rdx
          
        
          
            
            README_cache/markdown_github/__packages
          
        
          
            
            README_cache/markdown_github/packagesRUN_54db9098868f54f2b8c63ab2d22bf666.RData
          
        
          
            
            README_cache/markdown_github/packagesRUN_54db9098868f54f2b8c63ab2d22bf666.rdb
          
        
          
            
            README_cache/markdown_github/packagesRUN_54db9098868f54f2b8c63ab2d22bf666.rdx
          
        
          
            
            README_cache/markdown_github/packagesRUN_8e305290db9dd891a52a32af9e6b0f61.RData
          
        
          
            
            README_cache/markdown_github/packagesRUN_8e305290db9dd891a52a32af9e6b0f61.rdb
          
        
          
            
            README_cache/markdown_github/packagesRUN_8e305290db9dd891a52a32af9e6b0f61.rdx
          
        
          
            
            README_files/figure-markdown_github/BasePlot-1.png
          
        
          
            
            README_files/figure-markdown_github/TreePlot-1.png
          
        
          
            
            README_files/figure-markdown_github/TreePlotCOW-1.png
          
        
          
            
            README_files/figure-markdown_github/diagonalplot.png
          
        
          
            
            README_files/figure-markdown_github/radialplot.png
          
        
          
            
            data/wiot2000.RData
          
        
          
            
            data/wiot2001.RData
          
        
          
            
            data/wiot2002.RData
          
        
          
            
            data/wiot2003.RData
          
        
          
            
            data/wiot2004.RData
          
        
          
            
            data/wiot2005.RData
          
        
          
            
            data/wiot2006.RData
          
        
          
            
            data/wiot2007.RData
          
        
          
            
            data/wiot2008.RData
          
        
          
            
            data/wiot2009.RData
          
        
          
            
            data/wiot2010.RData
          
        
          
            
            data/wiot2011.RData
          
        
          
            
            data/wiot2012.RData
          
        
          
            
            data/wiot2013.RData
          
        
          
            
            data/wiot2014.RData
          
        
          
            
            docs/404.html
          
        
          
            
            docs/_pkgdown.yml
          
        
          
            
            docs/articles/gvtr.html
          
        
          
            
            docs/articles/gvtr_files/accessible-code-block-0.0.1/empty-anchor.js
          
        
          
            
            docs/articles/gvtr_files/d3-4.5.0/LICENSE
          
        
          
            
            docs/articles/gvtr_files/d3-4.5.0/d3.min.js
          
        
          
            
            docs/articles/gvtr_files/diagonalNetwork-binding-0.4/diagonalNetwork.js
          
        
          
            
            docs/articles/gvtr_files/figure-html/BasePlot-1.png
          
        
          
            
            docs/articles/gvtr_files/figure-html/TreePlot-1.png
          
        
          
            
            docs/articles/gvtr_files/figure-html/TreePlotCOW-1.png
          
        
          
            
            docs/articles/gvtr_files/htmlwidgets-1.0/htmlwidgets.js
          
        
          
            
            docs/articles/gvtr_files/htmlwidgets-1.5.1/htmlwidgets.js
          
        
          
            
            docs/articles/gvtr_files/radialNetwork-binding-0.4/radialNetwork.js
          
        
          
            
            docs/articles/index.html
          
        
          
            
            docs/authors.html
          
        
          
            
            docs/bootstrap-toc.css
          
        
          
            
            docs/bootstrap-toc.js
          
        
          
            
            docs/docsearch.css
          
        
          
            
            docs/docsearch.js
          
        
          
            
            docs/index.html
          
        
          
            
            docs/index_files/figure-html/BasePlot-1.png
          
        
          
            
            docs/index_files/figure-html/TreePlot-1.png
          
        
          
            
            docs/index_files/figure-html/TreePlotCOW-1.png
          
        
          
            
            docs/jquery.sticky-kit.min.js
          
        
          
            
            docs/link.svg
          
        
          
            
            docs/pkgdown.css
          
        
          
            
            docs/pkgdown.js
          
        
          
            
            docs/pkgdown.yml
          
        
          
            
            docs/reference/GVTlayout.html
          
        
          
            
            docs/reference/GVTplot.html
          
        
          
            
            docs/reference/GVTprune.html
          
        
          
            
            docs/reference/VACel.html
          
        
          
            
            docs/reference/VACmat.html
          
        
          
            
            docs/reference/VACnet.html
          
        
          
            
            docs/reference/figures/BasePlot-1.png
          
        
          
            
            docs/reference/figures/TreePlot-1.png
          
        
          
            
            docs/reference/figures/TreePlotCOW-1.png
          
        
          
            
            docs/reference/gvtBasePlot.html
          
        
          
            
            docs/reference/index.html
          
        
          
            
            docs/reference/switchEdge.html
          
        
          
            
            docs/reference/wiot2000.html
          
        
          
            
            docs/reference/wiot2001.html
          
        
          
            
            docs/reference/wiot2002.html
          
        
          
            
            docs/reference/wiot2003.html
          
        
          
            
            docs/reference/wiot2004.html
          
        
          
            
            docs/reference/wiot2005.html
          
        
          
            
            docs/reference/wiot2006.html
          
        
          
            
            docs/reference/wiot2007.html
          
        
          
            
            docs/reference/wiot2008.html
          
        
          
            
            docs/reference/wiot2009.html
          
        
          
            
            docs/reference/wiot2010.html
          
        
          
            
            docs/reference/wiot2011.html
          
        
          
            
            docs/reference/wiot2012.html
          
        
          
            
            docs/reference/wiot2013.html
          
        
          
            
            docs/reference/wiot2014.html
          
        
          
            
            man/FVAXnet.Rd
          
        
          
            
            man/GVTlayout.Rd
          
        
          
            
            man/GVTplot.Rd
          
        
          
            
            man/GVTprune.Rd
          
        
          
            
            man/VACel.Rd
          
        
          
            
            man/VACmat.Rd
          
        
          
            
            man/VACnet.Rd
          
        
          
            
            man/figures/BasePlot-1.png
          
        
          
            
            man/figures/TreePlot-1.png
          
        
          
            
            man/figures/TreePlotCOW-1.png
          
        
          
            
            man/gvtBasePlot.Rd
          
        
          
            
            man/switchEdge.Rd
          
        
          
            
            man/wiot2000.Rd
          
        
          
            
            man/wiot2001.Rd
          
        
          
            
            man/wiot2002.Rd
          
        
          
            
            man/wiot2003.Rd
          
        
          
            
            man/wiot2004.Rd
          
        
          
            
            man/wiot2005.Rd
          
        
          
            
            man/wiot2006.Rd
          
        
          
            
            man/wiot2007.Rd
          
        
          
            
            man/wiot2008.Rd
          
        
          
            
            man/wiot2009.Rd
          
        
          
            
            man/wiot2010.Rd
          
        
          
            
            man/wiot2011.Rd
          
        
          
            
            man/wiot2012.Rd
          
        
          
            
            man/wiot2013.Rd
          
        
          
            
            man/wiot2014.Rd
          
        
          
            
            vignettes/.gitignore
          
        
          
            
            vignettes/gvtr.Rmd