Man pages for MikkoVihtakari/sclero
Measure Growth Patterns and Align Sampling Spots in Photographs
| assign.size | Assign spot sizes to 'rawDist' objects for estimating spatial... |
| assign.value | Assign values to 'rawDist' objects for plotting. |
| auto.detect | Automatically detect the most likely action from a set of... |
| barium | Barium to calcium ratios for sample spots in shellspots... |
| coln | Print the order and names of columns in a data frame |
| convert.ijdata | Convert IJDATA object to a list of spatstat.geom objects |
| create.rawDist | Create rawDist data from arbitary coordinates |
| growth.dist | Calculate growth using a variety of measurement techniques |
| ijdata.define.names | Define names for ROI data |
| ijdata.define.spots | Define the spot sequences from an ImageJ zip file |
| intercept.psp | Calculate intercept for a spatstat psp object |
| is.clockwise | Check whether points for an 'owin' are clockwise |
| order.ijdata | Order IJDATA spot sequences and growth lines |
| plot.growthDist | Plot a growthDist object |
| plot.rawDist | Plot rawDist object |
| plot.spotDist | Plot spotDist object |
| pointsAlongLines | Find points that lie along line based on x- or y coordinates |
| print.spotDist | Print 'spotDist' objects |
| read.ijdata | Read ImageJ zip file containing several ROI files and extract... |
| samplemap | Common plotting function for plot.rawDist and plot.spotDist... |
| sclero | Measure Growth Patterns and Align Sampling Spots in... |
| select | Select an element of each vector from a list |
| shellsizes | Coordinates of sample spots together with spot size... |
| shellspots | Coordinates of sample spots and growth lines along a bivalve... |
| slope.psp | Calculate slopes for a spatstat psp object |
| spot.dist | Distance of sampling spots from margin along a measurement... |
| spot.dist2 | Distance of sampling spots from margin along a measurement... |
