API for NCI-CGR/TypeSeqHPV2
TypeSeq2 HPV Analysis Functions and Workflows
| Global functions | |
|---|---|
| .internal_control_summary | Source code |
| Internal_control_summary2 | Source code |
| adam_demux | Source code |
| coinfection_rate_histogram | Source code |
| collect_metrics | Source code |
| fmt_perc | Source code |
| get_command_line_args | Source code |
| get_grouped_df | Source code |
| get_run_metadata | Source code |
| hpv_status_circle_plot | Source code |
| lineage_plot | Source code |
| meth_startplugin_parse | Source code |
| methyl_variant_filter | Source code |
| my_parse_json | Source code |
| parse_key_value | Source code |
| percent_positive_histogram | Source code |
| plate_map | Source code |
| plate_summary | Source code |
| render_batch_qc_report | Source code |
| render_ion_qc_report | Source code |
| sample_summary | Source code |
| samtools_sort | Source code |
| save_value_to_csv | Source code |
| signal_to_noise_plot | Source code |
| startplugin_parse | Source code |
| subset_by_batch | Source code |
| tvc_cli | Source code |
| typing_variant_filter2 | Source code |
| vcf_to_dataframe | Source code |
