add_samples_adaptive | Add samples adaptively |
as_inits | Return the current state of a 'JointAI' model as list to be... |
create_missings | Create missing values in a 'data.frame' |
create_report | Create a html report of a simulation result using rmarkdown |
create_simulation_scenario | Create a simulation scenario from a JointAI object |
delete_MAR | Create MAR missingness |
delete_MCAR | Create MCAR missingness |
extract_basehaz | Extract the posterior mean of the regression coefficients for... |
extract_basehaz_knots | Extract the knots used for the spline specification of the... |
extract_covar_pars | Extract parameters necessary to simulate covariate data from... |
extract_mean_cens | Extract the mean censoring time form an object of class... |
extract_outcome_pars | Extract parameters necessary to simulate an outome from an... |
extract_rd_vcov | Extract the posterior mean of the random effects... |
extract_reg_coefs | Extract the posterior mean of the regression coefficients... |
extract_resid_sd | Extract the posterior mean of the residual standard... |
extract_types | Extract the model types of longitudinal variables from an... |
fit_models | Fit one more multiple models and obtain the model result |
get_compl_data_info | Summarize information of the complete simulated data |
get_data_info | Summarize information of the simulated data |
get_inits_JM | Generate initial values for a JointAI joint model |
get_miss_data_info | Summarize information of the incomplete simulated data |
get_res_df | Convert the simulation results into a data.frame The... |
get_result_default | Extract a summary of the model results from a standard model... |
get_result_JointAI | Extract a summary of the model results from a JointAI model... |
get_result_lme4 | Extract a summary of the model results from a lme4 model This... |
JM_imp_adaptive | Run a joint model with adaptively increasing the number of... |
lme_imp_adaptive | Run a joint model with adaptively increasing the number of... |
make_mv_vcov | Combine multiple variance-covariance matrices to one... |
make_vcov | Create a variance-covariance matrix from a vector of... |
reexports | Objects exported from other packages |
run_gr_check | Check the Gelman-Rubin criterion for a 'JointAI' object and... |
run_jointai_flex | Run a JointAI model with flexible number of iterations |
run_sim | Run simulation |
set_model | Set a model specification |
set_scenarios | Create a data.frame of the scenarios to run. A scenario... |
sim_corr_unif | Simulate uniformly distributed correlation elements for a... |
sim_covars_mvn | Simulate data from a multivariate normal distribution |
sim_data | Simulate data |
sim_outcome_glmm | Simulate a (multivariate) longitudinal outcome |
sim_outcome_joint_model | Simulate a survival and longitudinal outcome for a joint... |
sim_outcome_lm | Simulate a conditionally normally distributed outcome |
sim_outcome_survival | Simulate a survival outcome |
simvalidator | Simvalidator: validation of model performance via simulation |
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